SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 121224.XP_002428079 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  121224.XP_002428079
Domain Number 1 Region: 78-191
Classification Level Classification E-value
Superfamily POZ domain 5.65e-27
Family BTB/POZ domain 0.0016
Further Details:      
 
Weak hits

Sequence:  121224.XP_002428079
Domain Number - Region: 346-400
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00026
Family Tetracyclin repressor-like, N-terminal domain 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 121224.XP_002428079
Sequence length 536
Comment (Pediculus humanus corporis)
Sequence
MSQSQEKSINNSCSFADEDREDSSKHFMNDDIIVENILTPTVTIESDPESSSPNVSMNIT
TERDANMSLQIKSQVSAQQYCLRWKYHHSNLQVMFIQLLQRESFCDVTLACEGKMLRAHK
VVLSACSTYFDKIFSEHEEKDPVVILKDVKFVDIKALVEFMYKGEINVENSHLTSLLKTA
EELKIKGLADVSGKTIPKDDDDDDDAEENDSITFGSSSLALQSRDDERSNDVKHAAAEQI
GDYDDMFTPTIVEGAHSINEGSDNEDENMEKKDEEMEDANEYMDSANEQSFSTLITQLSD
HPLQDFQNDDNNERNSEHDNSETTSNLALQFPDVIKMNDYLTTGRRQQFWEEPFTRRLME
AIKNKEIEMKAAAELMGVSYGTLYGRYRDAYGCLKHPYRTKEFWAEQGPADILAKLQKKE
ITLFRAAEMLNVTVTTLANYLTTLRHEKENKNENEENHEKEESEDNVEEEDDEEMDVNDS
LDVFDENKPIPSKDAQQSNNNNNNNNNNSSMMNAEDEDEDSRSTSTMLDRSDEDYP
Download sequence
Identical sequences E0VPN5
vb|PHUM362040-PA|EEB15341.1|hypothetical 121224.XP_002428079 XP_002428079.1.24195

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]