SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 135651.CBN10805 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  135651.CBN10805
Domain Number 1 Region: 310-476
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 1.57e-20
Family Canonical RBD 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 135651.CBN10805
Sequence length 554
Comment (Caenorhabditis brenneri)
Sequence
MFSESDDEAPPSKQSKAVAAEDDEDEDDEEDEEEVEVDDEEEDEEEEEDEEEAEPVAKTP
ALKSALKTADSTKGKQVNITTVATPTTVDKKAPATPHPAKSAKNTVGEVPKLQFDDDSDE
DEEVEEEDEEEEEEEDDEAPTQKAPVVKQSLSQIAQAIEEDSDDEDEEDEEEEEEDEEDE
EEEEEEDAVEVPLIKSKADLLKQIAANRAAASSAQDSDEEDEEDEEEDEEEEDEEEEDEE
EEEEEQVKPVVKQTQPVKQKTQKLAEVSKPQATEKQGTKRKVDEAPVASKQMKSEGASII
TEEERRRNERDSRSLFIKEISKKAKDNEITSLVTGLDSFRRKKNSNFGWLVFNTVADCKK
AHDVLSKAKIQGKSLYVDYCLNESKSSKEHGQRPINPLQLFINALPSTCTNTDLKNVFRS
STEIKILHAGGQPNSKKRAFVTFGTEEDAQAAFSKSNGLRVNNHLVDVFFARQQGDKKND
VKPKKAPVAQKKVVPKVADSSDDSEEVASSDEGIEEVVEEPPKQKKLVKKVETKAVSRVQ
QKKPQFKKSFKGKK
Download sequence
Identical sequences G0PLE3
135651.CBN10805 CBN10805

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]