SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 15368.BRADI1G30460.1 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  15368.BRADI1G30460.1
Domain Number 1 Region: 20-61
Classification Level Classification E-value
Superfamily F-box domain 0.0000000497
Family F-box domain 0.0083
Further Details:      
 
Domain Number 2 Region: 150-213
Classification Level Classification E-value
Superfamily RNI-like 0.0000753
Family Rna1p (RanGAP1), N-terminal domain 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 15368.BRADI1G30460.1
Sequence length 232
Comment (Brachypodium distachyon)
Sequence
MEYSLGQRQCSLLAPGDGEPDRISALPDDLLLTILARLGCTSTAACTSVLSRRWSSLWTR
LREVILHGVALQPLESVLNHVSPAVSLLEIHVPEDYSPDPAPVSSLLHAAVRLAPEELVL
TLPARLVKIDLPRFHRATSITLTSRFLILRVPAAAAGEYCPMLETLSLSGGLIGNLDALL
SRCPRLRVLRLVAPNIMIDDKDPMVVHSETLQELFMEAKTAWLTSSPLCPSN
Download sequence
Identical sequences I1GVE8
15368.BRADI1G30460.1 EG:BRADI1G30460.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]