SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 164328.JGI72665 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  164328.JGI72665
Domain Number 1 Region: 154-486
Classification Level Classification E-value
Superfamily NAD(P)-binding Rossmann-fold domains 2.93e-38
Family Tyrosine-dependent oxidoreductases 0.0033
Further Details:      
 
Domain Number 2 Region: 645-758
Classification Level Classification E-value
Superfamily POZ domain 1.02e-23
Family BTB/POZ domain 0.019
Further Details:      
 
Domain Number 3 Region: 518-657,685-818
Classification Level Classification E-value
Superfamily ARM repeat 0.0000234
Family HEAT repeat 0.09
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI72665
Sequence length 945
Comment (Phytophthora ramorum)
Sequence
MLFGSQYDEDAATDHSGSSTTPPQSRKKKSVSSSSRKGSKISSRRDHKRPNMTAGQSSPT
QSLDSTNSSSASSSYLLANQRNGSNSNFNYAGFDASNGIAAVNAPSLLPKTRRRSAKKKN
DRTKKLKRQVDRQCMYPSVWKKLQFRKKIVQLATNLSDKPICVTGVDGFLASWIVCELLN
RGYHVRGTVQNGKDDISGLLQLPNARKNFSVVETSLLTPEACDMAVQGCEFVIHTGTPSS
CSVRDPLSEQQEPGVHSIGSRMHCIIPMMTNFIQACARARIKRVVLTSSIAAMADSVTPD
SIINDACWNVTSSLEKNPHFLSLKLAEEAAWQLVDQLPSDRRIDLVTMNPGTLFGPMLSK
SKLAPGNQVIYDLVTGQYSALVDLNWSMIDVRDCAVAHIAALENNDARGRYICVNRSVWM
KDVVDILSNNGYSGRDLPWKLGQVGASLYAYDPASVRSSPYLGDKVVEHLNIRFRSVDSS
IVESANDLLKWGLIKPWAEDHEALDVSSTLQMVLEGAVLQMLEVEETFSTWAICLQALRN
IWKQINRQDFRRMLHAVARVSADANIGTIASSFLSGKGELRGNILLTFVHMMDAEEVPTL
LSEGLLSVLYHMLQSTDEFPRCAAAHAIKHLVPAGYDPDVTIEVPPYLVDDHEELFLNSS
LSDLQFLVKGHIAPINAHKVVLFFRNSYFKNMVRFGSATSQTAVIEVDNCSYEVFSILLR
FLYTGKVDITADVAEELLQASSFYCVYELQKRTEAFLSGQICVENVVDLLTLSEVCNADD
LKKNCVPFLMRHIHEIVRLPAFEEHRVRSSEEVLKALTNMLGPEWEASYAKFKKSIGIQD
KEDEDEPAEAEKTDEEEEPPITHQVNEIQEAPLSPRFLLSPVPPPSYSGNQSVFATESPR
LNTVGEDKSMEGFHFMKTFGNEDVLFRRSRNFSEDFSEGLSEGVC
Download sequence
Identical sequences H3GBJ1
164328.JGI72665 jgi|Phyra1_1|72665|fgenesh1_pg.C_scaffold_1000107

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]