SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 164328.JGI77579 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  164328.JGI77579
Domain Number 1 Region: 10-157
Classification Level Classification E-value
Superfamily Kelch motif 2.09e-35
Family Kelch motif 0.0067
Further Details:      
 
Domain Number 2 Region: 123-297
Classification Level Classification E-value
Superfamily Galactose oxidase, central domain 1.44e-33
Family Galactose oxidase, central domain 0.019
Further Details:      
 
Domain Number 3 Region: 305-406
Classification Level Classification E-value
Superfamily POZ domain 2.43e-21
Family BTB/POZ domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI77579
Sequence length 406
Comment (Phytophthora ramorum)
Sequence
MALQSSSRAWINVPCENPSAAPCHRSLHVCAVRKDSLYIFGGYDGSNRINDFYEFNFKRK
LWSVVLAIGSAPSPRDRHVAVVYKDLFYVFAGFDGSSRVNDFIEYNFLTQRWSSVVVNAG
LPPTARHSHAAVVYDKSMYCFGGYDGSYRNDFHEFNFVAATGRVPRPRYRSSLVVHNHTC
VLFGGHDGSRHLNDAHVYDFDTHVWSLLQTEGPAPIARDSHVAVIHSDAMYIFGGSTGTA
VNDFYELNLESNTWQPMQFNGQPPGQRFCHVGTVYDANLIIFGGYDGSSRLNDFKQFRFG
EEEFQLDIPESTLISDLRILVNNDIMSDVTFVVEGIPVYGHKILCIRCNYFNAMLTGEML
ESRAREIQITDVRRPIFISLMEYLYTDYLDVAVDVAMELFVTADRL
Download sequence
Identical sequences H3GM83
164328.JGI77579 jgi|Phyra1_1|77579|fgenesh1_pg.C_scaffold_25000100

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]