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Domain assignment for 164328.JGI78285 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI78285
Domain Number 1 Region: 9-69,357-470
Classification Level Classification E-value
Superfamily TPR-like 5.97e-18
Family Tetratricopeptide repeat (TPR) 0.013
Further Details:      
 
Domain Number 2 Region: 286-386,433-578
Classification Level Classification E-value
Superfamily HCP-like 1.07e-17
Family HCP-like 0.0089
Further Details:      
 
Domain Number 3 Region: 771-984
Classification Level Classification E-value
Superfamily TPR-like 0.0000000000062
Family Tetratricopeptide repeat (TPR) 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI78285
Sequence length 1462
Comment (Phytophthora ramorum)
Sequence
MLRQMLVDAAAFLKAERYQEAQDAGRRVTQFDPNNFQAFMCVGLASFHLQEWEDCEDAYR
RAADIKPEMPAPWKVQSVYLVDLFEAKTDVKSKLEPLEKLVDINLRGKKIKRCQKWVAEV
AATAMELKMLPKTFDSWYSLVGGLDGDVGQLSLEKTANEELPAPLNIWLDLVDLLQNEEI
DALRPRMDAAIAFFMRFHLDALKASKKKPTLLKTVDALATTIIEWFPGSKIPAEFLLLRS
EDQDSPRDVEGCLNRLSLAKKVVTDKAKLLGCEDPLPSLYSEVKVLFMAATACEYSGDVD
RALENYRGVMGSDDLLLMVKAAIAAAELLTTKAQSKEALEVIDSVSLSEVGDESVCAAVL
CTRGWIQFQLGDFQQAQALLEANASKIPATDVFAKGRTLKRLAVVYWHLGGSHQSAKPGC
FAHLLQAAKLTPSDAEIFSWLGKWYQEVAKDILRAEKCFLKALSLSPTDELAGMALSSLY
DLQGKYGANVELWERVTEDQETAPTWALLRLAQHLVEQNDELAVGKMHLVLRNDPMNARY
WVILAHIYQNFDKHVSAQRSYLKAIELGEENWCVRCELARIEGSLLLFDDALDRIKPVVT
GELSDGKPDVTVASMIYADLLFQQAKYLCAEGLYGNAAANLKEASRMMKGLPSTSALSGS
VEACKLIGDIHCFAFYLSPDNFSSEGSSWVDFISAGRKAYEAAALLAERGEKKTVGGPDA
VAAERFYDIGLSYWYEAQALSNVRGIPSSAFSIEKGLANSDADATLSKLKAKASTNFKLA
LQEDPSCSLAWNGLALVSDSLLVKQFAWARAVQTGSSSDATWANLGMFYLSQADAVPSAA
SLAQKSFLQLQSVNPSNPSMWNGYAMLARRQASSTVQQRKAIEAFDCALQVGLDLDALLG
LSTALLDYGASVGESITEAPEHDSEQVMFYLKKYLERDPFNARAWHALGVAQHRLGLYTE
ALASYTHAASSARDQEGLEWNTLVTELGQLSDKSCDGIDDSALLQKIAATSGSSALKGIV
QAQLLYRQSKGGEALDLLHALIPRDEAQSAESNVVALVGLSMASLLMSKFGSKAVGLAAV
FKERLLSSVDQADSTLTTRDYLNLHLVELHERFVGAEDAYLTRLQALSQTNDGANSSSLW
MRLALATIDSQNLQVSSCLGEYLRSTARNVPSPGKDTVDRNFLDSLVGLFKAGPSGVKGL
CLDAQKLIRAQPWNSQAYVLAGTSILKRIGLETKRETHHDVLRHLLRLLQTGLSLAIAAS
GRDYDAAQLELLTSYCYAKLGEHDQATSFSIEGLTRVKESKKRGALTDSVDTDLLEARLL
SISNPAKAVQKYVDVVAAVSADTAAAASSRLVPILIELGGFYEEQQSLDAAINVWKLVAS
LTATKFITSADADDDVSSTTTALSSNSDTAACFLANLRLALIHGKKNNVKPARKHIKVAL
ALAEAGSDSSTVAAFVENVLAN
Download sequence
Identical sequences H3GNS6
jgi|Phyra1_1|78285|fgenesh1_pg.C_scaffold_30000090 164328.JGI78285

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