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Domain assignment for 164328.JGI79943 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  164328.JGI79943
Domain Number 1 Region: 160-322
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.97e-24
Family DnaQ-like 3'-5' exonuclease 0.0017
Further Details:      
 
Domain Number 2 Region: 50-76
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000615
Family CCCH zinc finger 0.0053
Further Details:      
 
Weak hits

Sequence:  164328.JGI79943
Domain Number - Region: 2-25
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.000327
Family CCCH zinc finger 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI79943
Sequence length 402
Comment (Phytophthora ramorum)
Sequence
MACRFFQSPQGCFRGASCTFRHDASNADLPLSAANPYANGAIPSSHPPRPCRFFSSESGC
RNGSNCPFVHAAIDPVDDAPEFAGYEETSAPPLPHEFPVAVNGAVFYNHVGLAPPTDTDN
SGDESAAGPKRKLQIQANPQKKETISEILPVLTRDIEGPFYAIDVECVATGSGTNDRDVA
RIAVVDEDEEVVFDQYVKPTKPIVSYLTQLTGITEDNLKEAPGLDEALVRLKAILPVESV
IVGQSIKKDLEWLTLQKPTDYKGEFDVADLFRLPMQLTNGVVRYRYFSLRHVAKYLLGHD
IQEADHDPVIDARYAMKVFKKFRYLHENPGRRDAVLQTLLKTPRTPSFAERYPVIDGVSM
RAPRKRSTSPSIRNANRVAAEQAQHATNGGGYYQQGQQPLYL
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Identical sequences H3GSG9
164328.JGI79943 jgi|Phyra1_1|79943|fgenesh1_pg.C_scaffold_44000088

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