SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 164328.JGI94281 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  164328.JGI94281
Domain Number 1 Region: 163-311
Classification Level Classification E-value
Superfamily L domain-like 5.78e-20
Family Rab geranylgeranyltransferase alpha-subunit, C-terminal domain 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 164328.JGI94281
Sequence length 364
Comment (Phytophthora ramorum)
Sequence
MTEAACSRDSTALTSDCSSQCYEGRPCIAFAAGGSCNATTFGTSSSGSSADSCSFECFTN
GPDDFAAQGSVAFTEYVFFIPYGSQESKWEANWTSSQASTVDSQLQTEVDETQMYPSESN
LVFEDVEPLKFLEDTTAAMFVGGTSVWGVRGKVSQLKLSTEFLSSNTQLKNITMVNLGFD
VDPPQSTFPTTNVESFRMSNCLLSTYPADLEFMTSVVHVDFSLNYFKDYPVKFSHDTMET
LNLSTNALTACSGDFPNMTNLDLSGNTLTELPSNIFDMPKLKILNLSDNSFTGVSLTTDQ
VTFLQSLETFTIDTFGDVSSCSESAQVKINDVAVCTSTGNAGSSSSSSDGTSSSNVAAIV
GGKP
Download sequence
Identical sequences H3HBL9
jgi|Phyra1_1|94281|C_scaffold_14000054 164328.JGI94281

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]