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Domain assignment for 203122.Sde_1955 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  203122.Sde_1955
Domain Number 1 Region: 807-1032
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 2.62e-52
Family Multidrug efflux transporter AcrB transmembrane domain 0.0002
Further Details:      
 
Domain Number 2 Region: 299-506
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.83e-35
Family Multidrug efflux transporter AcrB transmembrane domain 0.00031
Further Details:      
 
Domain Number 3 Region: 42-127
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 3.49e-21
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0022
Further Details:      
 
Domain Number 4 Region: 153-191,277-333
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 2.09e-18
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.011
Further Details:      
 
Domain Number 5 Region: 192-274
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 7.19e-17
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0041
Further Details:      
 
Domain Number 6 Region: 724-808
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0000000000000106
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.017
Further Details:      
 
Domain Number 7 Region: 578-666
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.000000366
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 203122.Sde_1955
Sequence length 1043
Comment (Saccharophagus degradans 2-40)
Sequence
MIDSILRLAIERRLLILCFIFLIVGVGVWSYQKLPIDAVPDITNVQVQINTAAPGYSPLE
SEQRITYPVETALAGLPNLSYTRSLSRYGLSQVTVVFEEGTDIYFARNLINARLGAIKSV
LPPGLEPEMGPISTGLGEIFMYTVQAEPNAKMATGEPYTATALREIQDWIIKPQLAQVKG
VIEVNSIGGYNKQYHVMPDPAKLLVYKVSVEDVVHALQANNDNRGAGYIERNGQQLLVRS
PGQLGTVEDIGNVIITERDSVPITVKDVADIGIGKELRTGAATRDGVETVLGTAMMLIGA
NSRTVAQDVASKLDDIQASLPEGVVAEAVYDRTALVDKAIATVSKNLMEGALLVIVVLFL
LLGNFRAALITAAVIPLAMLMTITGMVKTGVSANLMSLGALDFGLIVDGAVIIVENCVRR
LAENQHKNGQQDLRERLSTVFDATSEVIRPSLFGVAIITIVYIPIFSLTGVEGKMFHPMA
ATVVMALLSAMVLSLTIVPAAVAVFMNGKISEKESIVITKAKSAYRPLLKLALKFRWAVV
SFATFLVVFCLWLASTLGSEFIPQLNEGDIALHAMRIPGTGLEQAVEMQEILEKRIKAFP
EVEKVFARIGTAEVATDPMPPNVADNFVILKPRSDWPDTSKTKDELVEEMERALEELPGN
NYEFTQPIQMRFNELISGVRADLGIKIFGDDLDQLVLTANDVLKVVNGIDGAADARVEQV
TGLPTLSVIPNRTALGRYGLNVAELQDWVSAAIGGESAGILYEGDRRFELIVRLPETTRR
DIDRLKFLPVPLKNGEYVPLEEVATLDISPAPAQISRENGKRRIVVTANVRGRDLGSFVK
EVQESIREKADIPPGYWLDYGGTFEQLESASQRLSIVVPLTLLVILGILVMAFSSVKDAL
IIFSGVPLALTGGVLSLYLRDMPMSISAGIGFIALSGVAVLNGLVMLAFIRQLWHETGQF
NESIIEGAMIRLRPVLMTALVASLGFVPMALNTGTGAEVQRPLATVVIGGIISSTILTLL
VLPVLYQWVHRREAIQHTLHHRE
Download sequence
Identical sequences Q21JB4
203122.Sde_1955 WP_011468433.1.82451 gi|90021600|ref|YP_527427.1|

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