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Domain assignment for 203122.Sde_3876 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  203122.Sde_3876
Domain Number 1 Region: 37-137
Classification Level Classification E-value
Superfamily Lamin A/C globular tail domain 2.53e-16
Family Lamin A/C globular tail domain 0.002
Further Details:      
 
Domain Number 2 Region: 146-290
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0000289
Family beta-Galactosidase/glucuronidase, N-terminal domain 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 203122.Sde_3876
Sequence length 947
Comment (Saccharophagus degradans 2-40)
Sequence
MVANTVSPLLLKTVRGIILLAGSAALIACGGGGGGSSNSSSSSSSSNSSTSSGGACTDCI
RINEVVASNSTYDDEDGDSPDWLELYNTSASAVNLSGWTLSDDDDEPAMWTFPNQTIEAG
GYLRIWASDKNSTTVGTYRTLVNSSDTFRYSTTEPSASWTSTSFNDASWQSGAGGLGYGD
NDDTTVVPTGTQTLYVRKTFSLTSTANIQNMWLDIDYDDAFVAYLNGTEIARGNILGTNP
AHNAATVAEREAQMYQSGLPERHALTDFADLLVEGDNVLSIQVHNISNTSSDLTVIPFLT
ALYNSTTNDGVTPPAILGFENYGLHTNFKISSGGETLYLYNSDGVEVDAFDVPALITDIS
VGVSNSNGNIVYYQDTTPGARNASTEYQGFVSSELFFSNNGGTSAATSVSISGAANGEQI
RYTTNATVPTSSSSAYSSAIAISGNTVIRARAFRSGYIPSRTFSRTYLPEADHDIAVVTL
VTEPSNFFDYTTGIYESGPNASNELPYFGANFWQDWERDIHFSFYEPTGELGLAMDAGVK
IFGGWSRANSQRSLALYARGRYGESEIDYPLFPQREYQEFQSLVLRNSGNDWLNTMMRDA
ALTSLMDGSGLDIQAHRPTAVYLNGQYWGMYNLREKVSEHFLASRHNVEANTLDILEREG
AVVDGSNIDYLALIDFVENNSLSNTSNYNYVASEIDIENFITYYVAQIYFNNQDWPGNNI
KYWRAPGGKWRWILYDTDFGFGIWNVYDYSADTLAFALSEFGPEWPNPPWSTLLFRKLME
NDTFKTLFIRRFNDELNTRFEASHVTAHIDAMAAEIATEIPKQWQRWDGSDGANWQGNIN
NMKTFAQQRSANMIDYMQNNLAAGQLHPLTVTINNSARGKVQLNSALIESANWQGNYFEN
ITLEATAIANDGYVFSHWEGASSATSTSITFSLNSATTLNAVFVPGS
Download sequence
Identical sequences Q21DU8
203122.Sde_3876 gi|90023516|ref|YP_529343.1| WP_011470346.1.82451

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