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Domain assignment for 203124.Tery_1541 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  203124.Tery_1541
Domain Number 1 Region: 302-497
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.56e-48
Family Ribonuclease PH domain 1-like 0.00000846
Further Details:      
 
Domain Number 2 Region: 4-142
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.67e-42
Family Ribonuclease PH domain 1-like 0.0000267
Further Details:      
 
Domain Number 3 Region: 143-234
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.27e-27
Family Ribonuclease PH domain 2-like 0.0021
Further Details:      
 
Domain Number 4 Region: 460-558
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.38e-26
Family Ribonuclease PH domain 2-like 0.0001
Further Details:      
 
Domain Number 5 Region: 566-650
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 2.53e-23
Family Eukaryotic type KH-domain (KH-domain type I) 0.0027
Further Details:      
 
Domain Number 6 Region: 628-706
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.04e-17
Family Cold shock DNA-binding domain-like 0.00049
Further Details:      
 
Domain Number 7 Region: 236-329
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.00000000000000759
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 203124.Tery_1541
Sequence length 717
Comment (Trichodesmium erythraeum IMS101)
Sequence
MEEIDKSISFDGRDIRLKVGLFAPQAGGAVMIESGDTAVLVTATTAKGREGIDFLPLLVD
YEERLYAGGKIPGGFLRREGRPPEKVTLTSRLIDRPLRPLFPSWLRDDIQIVATTLSMDE
EVPPDVLAVTGSSVAVLLAKLPFYGPMAAVRVGLVGDDFIINPTYREVKNGDLDLVVAGS
PQGVIMVEAGANQLPEQDIIEAIDFGYEAVCDLIQAQREIIAEMGIELVELEPPEVDPTL
ENYIKEKATEQIKEILSQYDLDKNQRDEKLDEIKDSLAESITELPEEEAVRAMVESESML
LGNAFKSVTKKLMRQQIVAEGIRVDGRKLDEVRPVSCRVGVLPSRVHGSSLFNRGLTQVM
SAVTLGTPGDAQELADDLHPQDEKRYLHHYNFPPFSVGETKPLRQPGRREIGHGALAERA
LIPVIPKSDIFPYVIRVVSEVLSSNGSTSMGSVCASTLGLMDAGVPIVKPVSGAAMGLIK
EDEEVRILTDIQGIEDFLGDMDFKVAGTDSGITALQMDMKITGLPIEVIADAIHQAKPAR
IHILDKMLSVLDLPRPDMSPYAPRLLSFKIDPEMIGLVIGPGGKTIKGITEETGVKIDID
DDGTVTIAAADGEKAKQACNIIQGMTKKLNPGDVYVGRVTRIIPIGAFVEVFAGKEGMVH
ISQIADYRVGKVEDELAIGDEVIVKVREIDSKGRVNLTRLNIHPDEAAAARANAMNY
Download sequence
Identical sequences Q115K2
203124.Tery_1541 WP_011611198.1.43450 gi|113475234|ref|YP_721295.1|

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