SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 214684.CNG04440 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  214684.CNG04440
Domain Number 1 Region: 1346-1432
Classification Level Classification E-value
Superfamily BRCT domain 0.000000249
Family 53BP1 0.065
Further Details:      
 
Weak hits

Sequence:  214684.CNG04440
Domain Number - Region: 204-271,322-344
Classification Level Classification E-value
Superfamily BRCT domain 0.000111
Family DNA ligase 0.063
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 214684.CNG04440
Sequence length 1538
Comment (Cryptococcus neoformans var JEC21)
Sequence
MRTDLATAKIMSLSARLRPVFPSDLLQFPQHCRHKRKPHLHQPMSHYPSDRDPVDPSRPA
PYPPLPTHPRPYYSDPALRPPSRELSTRMHDYGGQWTAQDTYRRYPASESSGAAQPRREI
DLREQLERRRKEREIERRRDELEMERQRDELEREQQRLERELEQRMEELEQERRRKEREG
ATKLKMRMAAPPRPAHPASPPPRPPSPAPTPSVRKPVFHDRGFFLAKDIIQAGGPSKTRL
MSLIREKGKGTAFPDPLRPKVVYIIVRLDSSCPKNYTALAATGTETFHQCSITGDWTTPN
VIKHLAKVKGDFPANEFSSGINRKYVLREEWVDECIAKKRLIDEREGFGGWEVKVTFDPS
LANGPFLPPVPSAASAPPSLLARIGSSSISTPPDGETSRDVIGSNDLLSRIGSPSIQETV
VSPGNLLSRIKSPSISLAQHGESSSNTLNEDGVDDQHRSSHFYVDPQSQSQSQPQSPTQS
PPPAQQLLQRPPTPPMPPQLSPLPTRPFSRSSQPLPTPPTGGDGGEPLTQPVPRASTTTS
SPLDLSLPSRPAGRQYEDQRHESQRERPNYDNQRLPPRQPRERERGMDPRFSSSRSRSPL
ASPPIGQTSRRNRRPSHSPPPPARRRSPSPLTHAYQDSYPRFSQAGEEHLSSRPNTPPTP
GVPDMPTSNNSLTANQTQAQTLNQNQNQIGLGHLPNASQATFTSSLPPQTSRPSQPTRPI
TGPLLNSRLPSRPSELPLQPSPSSQFAQPTQPTSTPESASTSASASASARPQTTMRSVPV
AVPLSGHGAPHRRMTPAPGPSAAQVRSPNLSSRLSQPAQPVVLPLSQPPQTHVQYPPSPP
HSASETVRQSQTVPLQPQTQSQPQSQSHSQLQQRTQPSSHRSPQNVPAPQASQASHSTHP
TPPVKPLSSQSKGSTAVNTGQGVNQGTTIPPLTGTRTGAGTDQHQHQLDVKNMEAVVGAG
ARAENSKGTNQSLIQSQVKSEDKKDNSVKGRKKNAGKKKGKGKEIQNGAQIAKVESQKGK
LQLKSENQNRDQNWRNGTDEAKEEKIDANLNVEQGEHGEKNKVDQKGQSQKEKGKPKVIP
DAEAETFSSSQGSLHFSLPVVDTLPLSIHPARPEHAKLTQPIQPDHPSQSSEPFDSFHLP
SSLPFPQSDTLGLASSPDVLTTPGASHEQALSLVNNGSMQSPLPPSQTLASSSSLSSPNA
SVRSVQALQPLQSTMASSDRAAGSSTEHEQILPSSPGQVAHVPRVRPDAHTSTIPSPLFL
RMPPISSPSASPHNLSSRTLASSSTTASQVSVPMQEKEKDKDQIKVDQNGSQAGKIESVD
KGKGEERLGDTQGAGLFTVAGAVPLSFWVYGGSRARTLEIVITHAGGGILTSPTLAGFLV
LPLPPSSPINNPDHIEAVRSVRGQEWRVVVSEEWVLDCVEKGELLDVKRYLLEVPPSEEE
EVAGVLEDIDMEEEEEIRGGGEGHSDEREGNSDGHGNAGESVRIEEAINSEKSAIKKPEK
SSSGWMSMFTRKRPAPDGDEEVYIGKRGRGFHSDDTSA
Download sequence
Identical sequences XP_572125.1.95466 177.m03286 214684.CNG04440

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]