SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 216895.VV1_1763 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  216895.VV1_1763
Domain Number 1 Region: 292-526,554-774
Classification Level Classification E-value
Superfamily Six-hairpin glycosidases 2.21e-83
Family Trehalase-like 0.027
Further Details:      
 
Weak hits

Sequence:  216895.VV1_1763
Domain Number - Region: 184-285
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 0.0628
Family Intein (protein splicing domain) 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 216895.VV1_1763
Sequence length 779
Comment (Vibrio vulnificus CMCP6)
Sequence
MTLAMLTAGCSTTITGAPLRASQFKNVIDRSGSPEYMRDYDFDDHQRFNPFFDMGAWHGH
LLPDNAEGMGGFPGTALLTEEYINFMANNFDRLSVFKEGKRVEFTMEAYSLPGALVQKLT
ADEVTVEMTLRFVSNRTSLLETHIITDSPLELVWDGQLLEQYHAKEGKSQSDKTIDEQYP
DYHRTLVATDDGLTVTFGKVRSTWDLLTSGESEYQIHKSVKMNTQVNGHQFTSTAKINAS
TKIYTTYSHVLTAKENQAEQAKIQDILANPQAYLSASEQRWEGYLTQGLTNPHATSEQER
VAVKAMETLNGNWRGVAGAMKFDSVTPSVTARWFSGNQTWPWDSWKQAYAMAHFNPDVAK
NNIRAMFAYQIQADDAVRPWDVGYVPDLLAYNLSPERGGDGGNWNERNTKPSLAAWAVME
VYKTTQDKAWLEEMYPKLVAYHDWWLRNRDHNGNGVPEYGAARDKAHNNAAGEMYFEVIK
GDRTTTITGQAAYEKVLKQGDYDRIESPAQTAASWESGRDDAAVFGFIDQDQLETYLANG
GQRSDWVVKFAQNRAEDGTLLGYSLLQESVDQASYMYSDNQYLAEMADLLGKPEQAKTFR
AKADKLADYINTCMFDESTGFFYDIRIEDQPLANGCAGQPIVERGKGPEGWSPLFNGAAT
QAHADAVVKVMKDPQEFNSYVPLGTAALSSPAFGPDIYWRGRVWVDQFYFGLKGMERYGY
RQDAVAMASAFFNHADGLVQDGPIRENYNPLTGEQQGAPNFSWSAAHLYMLYNDFFTAE
Download sequence
Identical sequences 216895.VV1_1763

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]