SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 218491.ECA4068 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  218491.ECA4068
Domain Number 1 Region: 24-367
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.08e-85
Family Pectate lyase-like 0.000000000318
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 218491.ECA4068
Sequence length 374
Comment (Erwinia carotovora atroseptica SCRI1043)
Sequence
MKYLLPTAATGLLLLAAQPAVAANTGGYATTDGGETSGAVKKTARSLQEIVDIIEAAKVD
SKGKKVKGGAYPLIITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITILGTNGS
SANFGVWIVNSSDVVVRNMRFGYMPGGAQDGDAIRVDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGASNTDTGRNLTYHHNIYRDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNVTKPADFSKYNITWGRPSTPHVNADDWKNTGKFPSISYKYSPVSAQCVKDKLANYAG
VSKNLAVLTAANCK
Download sequence
Identical sequences Q6CZT3
218491.ECA4068 gi|50122988|ref|YP_052155.1| WP_011095542.1.17763 WP_011095542.1.32123 WP_011095542.1.57850 WP_011095542.1.77917 WP_011095542.1.79946 WP_011095542.1.80346 WP_011095542.1.94180

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]