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  Home > Genomes > STRING v9.0.5 > 220341.STY4945

Domain assignment for 220341.STY4945 from STRING v9.0.5

Domain architecture

Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  220341.STY4945
Domain Number - Region: 29-148
Classification Level Classification E-value
Superfamily cAMP-binding domain-like 0.000124
Family cAMP-binding domain 0.021
Further Details:      
 
Domain Number - Region: 154-217
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0299
Family GntR-like transcriptional regulators 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 220341.STY4945
Sequence length 223
Comment (Salmonella typhi)
Sequence 
MKQLNGGNVYRPTGKEKNLQAILNIHRHVIQNISPVTITAGKTLDIKIDNQSHILLITKG
AIKVCRRIDSIVMGCGVSPMILGLVDAYADLYQLEENSDVFFIAETTCEYYPVPVKDFVE
IADEKHLWRDISNILMYRIAFMSNRDRNLIGQDAYSQIKALLLELWSYPESSRFEINAQN
FIQQRTGLSRSRIMQVLSELKAGNYIKILHGRLLELRNLPVSF
Download sequence
Identical sequences Q8Z0S6
gi|378962816|ref|YP_005220302.1| NP_459001.1.84458 WP_000811633.1.100008 WP_000811633.1.100036 WP_000811633.1.100079 WP_000811633.1.100196 WP_000811633.1.100284 WP_000811633.1.100313 WP_000811633.1.100314 WP_000811633.1.100321 WP_000811633.1.100354 WP_000811633.1.100421 WP_000811633.1.100446 WP_000811633.1.100592 WP_000811633.1.100610 WP_000811633.1.100732 WP_000811633.1.100733 WP_000811633.1.100739 WP_000811633.1.100764 WP_000811633.1.100799 WP_000811633.1.100941 WP_000811633.1.100953 WP_000811633.1.101011 WP_000811633.1.10108 WP_000811633.1.101226 WP_000811633.1.10124 WP_000811633.1.101271 WP_000811633.1.101312 WP_000811633.1.101322 WP_000811633.1.101374 WP_000811633.1.101616 WP_000811633.1.101890 WP_000811633.1.101941 WP_000811633.1.102050 WP_000811633.1.102087 WP_000811633.1.1038 WP_000811633.1.104 WP_000811633.1.10401 WP_000811633.1.10428 WP_000811633.1.10459 WP_000811633.1.10475 WP_000811633.1.10511 WP_000811633.1.10514 WP_000811633.1.10530 WP_000811633.1.10532 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WP_000811633.1.99369 WP_000811633.1.99388 WP_000811633.1.99397 WP_000811633.1.99463 WP_000811633.1.99483 WP_000811633.1.99546 WP_000811633.1.99579 WP_000811633.1.99595 WP_000811633.1.99671 WP_000811633.1.99676 WP_000811633.1.99764 WP_000811633.1.99829 WP_000811633.1.99837 WP_000811633.1.99841 WP_000811633.1.9992 WP_000811633.1.99996 gi|16763384|ref|NP_459001.1| AE014613|CDS_4788939-4788268 AL513382|CDS_4806015-4805344 gi|29144862|ref|NP_808204.1| 209261.t4635 220341.STY4945 gi|488657066|ref|YP_007928869.1|

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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