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Domain assignment for 224915.bbp336 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  224915.bbp336
Domain Number 1 Region: 3-144
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.67e-48
Family Ribonuclease PH domain 1-like 0.0000186
Further Details:      
 
Domain Number 2 Region: 299-492
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.47e-47
Family Ribonuclease PH domain 1-like 0.0000228
Further Details:      
 
Domain Number 3 Region: 450-548
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 3.93e-27
Family Ribonuclease PH domain 2-like 0.0001
Further Details:      
 
Domain Number 4 Region: 145-235
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.54e-25
Family Ribonuclease PH domain 2-like 0.0015
Further Details:      
 
Domain Number 5 Region: 554-639
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.18e-22
Family Eukaryotic type KH-domain (KH-domain type I) 0.0032
Further Details:      
 
Domain Number 6 Region: 618-690
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.58e-20
Family Cold shock DNA-binding domain-like 0.000071
Further Details:      
 
Domain Number 7 Region: 238-320
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 1.57e-16
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 224915.bbp336
Sequence length 693
Comment (Buchnera aphidicola)
Sequence
MLNPIVRKFQYGQHIVTLETGIMARQATAAVLTSMDDTTVFVTVVGQKKLQTEQKFFPMT
VNYQERTYAAGRIPGGFFRREGRPSENEILIARLIDRPIRPLFPKRFFNEVQIIATVVSL
NPQVNPDIVAIIGASAALSISGMPFLGPIGAARIGYINNQYILNPNVNEIKSSSLDLIIS
GTEESVLMVEAEANMLTEEQIINAINYGHEQQKIVIKNIEHFAKKVKIPVWEQCLYPVND
DLEKRIIEISEQEIVKAYNIFDKVIRLDVLDKIKSKAIEIIISEYSGIDEFEITSIISNI
ERKIVRNRVLKNRIRIDGRNKDEIRTLDVRTGVLPRVHGSALFTRGETQSLVSVTLGTSR
DAQNLDELLGDKTDNFLFHYNFPPYAVGEIGMVGSPKRREIGHGKLAKRSILAVMPKLDL
FPYTIRIVSEITESNGSSSMASVCGASLALMDAGVPISNAIAGIAMGLIKEGDDFVVLTD
ILGDEDHLGDMDFKISGSKKGITALQMDIKVKGITNEIMKLALYQAKNARIHILNIMKKS
LNVPRKDISIFAPRIHTIKINPEKIKDVIGKGGSVIRMLTEETGTTIEIEDDGTVKISAV
MQEKAKCAIQRIKEITAEVEVGSVYTGKVTRIVDFGAFVSIGIGKEGLVHISQIAHKRVD
KVSDHLRLHQEIFVKVLEVDRQGRLRLSIKGAK
Download sequence
Identical sequences Q89AF8
224915.bbp336 gi|27904826|ref|NP_777952.1| WP_011091458.1.17423

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