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Domain assignment for 226186.BT_0886 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  226186.BT_0886
Domain Number 1 Region: 299-501
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 4.84e-47
Family Multidrug efflux transporter AcrB transmembrane domain 0.00000388
Further Details:      
 
Domain Number 2 Region: 807-1031
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 4.97e-44
Family Multidrug efflux transporter AcrB transmembrane domain 0.0000133
Further Details:      
 
Domain Number 3 Region: 565-672
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 2.51e-28
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00071
Further Details:      
 
Domain Number 4 Region: 39-133
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.86e-26
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0000664
Further Details:      
 
Domain Number 5 Region: 136-183,277-333
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 8.76e-26
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0026
Further Details:      
 
Domain Number 6 Region: 184-274
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 2.88e-19
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00042
Further Details:      
 
Domain Number 7 Region: 723-808
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 2.88e-16
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 226186.BT_0886
Sequence length 1048
Comment (Bacteroides thetaiotaomicron VPI-5482)
Sequence
MFSKFFINRPIFATVLALLIVVAGLVALNILPVAQFPEITPPTVQVSAVYPGANAETVAQ
TVGLPIEQQVNGVDGMLYMSSNSSSSGAYSLTITFAVGTDIDMATVQVQNRVSVAQSSLP
EPVVVQGVTVQKQSSNIVMFLTMTSKDSVYNSLYLTNYAKLNLVDQLSRVPGVGAVNVMG
AGDYSMRIWLDPEAMRIRNISPAQVYQSIQSQNMEVSAGYIGQPIGQDNKNAFQYTLNVQ
GRLISPEQFGNIIIRREQDGAMLRLKDIARIDLGSASYSVVSRLKGMPTAAIAIYQQPGS
NSLDVSKGVKAKMEELATSFPTGVAYNVTLDTTDVIHASIDEVMVTFFETTLLVVLVIFL
FLQNWRAVIIPCITIPVSLIGTLAVMAAFGFSINTLTLFGLILAVAIVVDDAIVVVENAS
RLLETGQYSTREAVTKAMGEITGPIVGVVLVLLAVFIPTMMISGISGQLYKQFALTIAAS
TVLSGFNSLTLTPALCALFLKKSKPSNFFIYKGFNKAYDKTQGVYDSTVKWLLQRPLISF
VSFAILTVIAVILFMRWPSTFIPDEDDGYFIAVVQLPPAASLERTQAVGDKINAILDSYP
EVENYIGITGFSVMGGGEQSNSATYFVVLKNWDERKGKEHTAAAVVDRFNGEAYMEIQAG
QAFAMVPPAIPGLGASGGLQLQLEDRRNLGPTEMQQAIDALLASSHSKPALASVSSQYQA
NVPQYFLNIDRDKVQFMGIALNDVFSTLSYYMGAAYVNDFVEFGHIYQVKIEARDQAQRV
IDDVLKLSVANSAGEMVPLSSFTKVEEQLGQDQINRYNMYSTAALTCNVAPGSSSGQAIQ
EMETLFKEQLGDEFGYEWTSVAYQETQAGNTTTIVLVMALIVAFLVLAAQYESWTSPVAA
VIGLPVALLGAMIGCMIMGTPVSVYTQIGIILLVALSAKNGILIVEFARDFRAEGNSIRE
AAYEAGHVRLRPILMTSFAFVLGVMPLLFATGAGAQSRIALGTAVVFGMAMNTLLATVYI
PNFYELMQKLQEKFSRKKDDDVKKDTNM
Download sequence
Identical sequences A0A1H5WB01 C6IG39 Q8A9C9
gi|29346296|ref|NP_809799.1| 226186.BT_0886 NP_809799.1.73244 WP_008765716.1.28290

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