SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 227377.CBU_0550 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  227377.CBU_0550
Domain Number 1 Region: 254-612
Classification Level Classification E-value
Superfamily beta-lactamase/transpeptidase-like 1.75e-94
Family beta-Lactamase/D-ala carboxypeptidase 0.00021
Further Details:      
 
Domain Number 2 Region: 61-253
Classification Level Classification E-value
Superfamily Penicillin binding protein dimerisation domain 6.67e-52
Family Penicillin binding protein dimerisation domain 0.00054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 227377.CBU_0550
Sequence length 615
Comment (Coxiella burnetii)
Sequence
MIGMNRERLTIKNIHLETHLFKSRCLTALILLLIFAFILIGRLIYLQIKNHHFYSTLSRH
NLLNIIPIEPNRGLIFDRNGVLLAKDIPTYILTILPNGTHHLNETIRELTKIIPISSDEI
KQFHHILYQYHRYQPVPLKYKLTNEEVARFYVNQYRFPDVRIETRMMRYYPLGDLTSDVV
GYVGRINARELQKINTNNYNIDDDIGKMGIEKYYENELHGTMGAEEAEINASGRIVRILK
RVPPTPGTNIYLTIDSNLQTEARKVLGEESGAIVAIQPSTGQVLALVTKPSFDPNPFVSG
LSQQDYQKLVNSPQHPLYNRAIRGQFASGSTVKPFLALFGLDMGIITPQYRIYDPGWFQL
PNTQHIYHDWRERGHGWVNVVKAIAVSCDVYFYNLAVALGIKRMDDILQRFGFGQLTGID
LPEEVPGLVPSPRWKMGTQGKPWYTGDTIEAGIGQGFFLVTPLQLAQATATLAEHGKRYR
PTLLFKSVEPTGKVNVQQPIPKPPIFLKNPDNWDIVIHAMQEVVDKPWGTADFFGRHPGF
TVAAKTGTAQVYGHQRDEDKSRTNIPKRLRNNHLFIAFAPVENPQIAVAVVVEHSAMADK
MAGEIINYYFKHQQK
Download sequence
Identical sequences A0A2K2EJE0 Q83DY8
227377.CBU_0550 gi|215918996|ref|NP_819582.2| NP_819582.2.72601 WP_010957656.1.15899 WP_010957656.1.20088 WP_010957656.1.39746 WP_010957656.1.53098 WP_010957656.1.55635 WP_010957656.1.56161 WP_010957656.1.68745 WP_010957656.1.68840 WP_010957656.1.73073 WP_010957656.1.88235 WP_010957656.1.8942 WP_010957656.1.92481 WP_010957656.1.96664

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]