SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 227882.SAV_3708 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  227882.SAV_3708
Domain Number 1 Region: 72-368
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 4.21e-70
Family Lambda integrase-like, catalytic core 0.0019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 227882.SAV_3708
Sequence length 393
Comment (Streptomyces avermitilis)
Sequence
MAPRKRNPNGSGSIWQRKDGRYEARVYVPQPDGTRKRKTVYGTTWEECDTKRQELVLRDR
QGIPTPTRSAKLSEWLPYWLKHYVEPRRKLSTYDKYEVQVRLYLVPLLGTRRLESLSVAD
VRRFITRVQNAHTAATAKESHRVLRTALTAAVREELITRNVASLVEPPRVKQREIRPWSL
EETLSFLEAARSDPLYAAFVLAIAMGLRRGELGGLRWSDVDLDNRVVHVRQQTQRRRGTL
YDDDPKSRRIRVVPMPALCIAPLRWHRLRQRETFARTGVAWCEAGYVFATRNGRPVEPRN
VYRSFTRVAADAGLRVVRLHDARHGCATLLTAAGVAPRVIMEILGHSQISITMDVYTHVV
HDTQREAISHMDRLLKRRLPTSLSGGAGSIEFP
Download sequence
Identical sequences Q82H38
WP_010985139.1.19017 WP_010985139.1.30226 WP_010985139.1.49792 WP_010985139.1.60620 WP_010985139.1.68722 227882.SAV_3708 gi|29830251|ref|NP_824885.1| APC67028.0 SvR495

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]