SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 227882.SAV_5106 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  227882.SAV_5106
Domain Number 1 Region: 71-103,188-371
Classification Level Classification E-value
Superfamily ClpP/crotonase 3.81e-48
Family Tail specific protease, catalytic domain 0.0000752
Further Details:      
 
Domain Number 2 Region: 95-205
Classification Level Classification E-value
Superfamily PDZ domain-like 1.45e-16
Family PDZ domain 0.075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 227882.SAV_5106
Sequence length 389
Comment (Streptomyces avermitilis)
Sequence
MSGPDPFCEPRRFGRGAALTLLFASVLVAGAATGSFDEPDDSGRKASSARPAPASHREDV
AEAAAEAAADGKSPVEAAERAVSRSGDRWGAVYSQGEYEEFEEALDGQYTGVGLWARRER
DGRIEVSRVQSGSPAAAAGIREGDRLRTVDGENVAGKPVTDVVSLLRGDAGDAAAGTRVR
LGLARGTHAWDETVRRARLSTDPVTVRRLADDVTVIKVAAFTKGSGDRVRAAVADAPHAD
GIVLDLRGNSGGLVTEAVTAASAFLDGGLVATYDVNGEQCALHADSGADTTRPLVALVDG
GTMSAAELLTGALQDRGRAVVVGTRTFGKGSVQMPSRLPGGSVAELTVGHYRTPSGHSVD
GRGITPDLEADTEALERAGTVLSGLGDPS
Download sequence
Identical sequences Q82D78
gi|29831649|ref|NP_826283.1| WP_010986511.1.19017 WP_010986511.1.30226 WP_010986511.1.49792 WP_010986511.1.60620 WP_010986511.1.68722 227882.SAV_5106

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]