SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 247156.pnf2210 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  247156.pnf2210
Domain Number 1 Region: 17-291
Classification Level Classification E-value
Superfamily DNA breaking-rejoining enzymes 5e-47
Family Lambda integrase-like, catalytic core 0.0007
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 247156.pnf2210
Sequence length 311
Comment (Nocardia farcinica IFM10152)
Sequence
MGATTADIDDETTLPLAVHIEQFLTDLANANRPANTLRAYRGDLTGFAEHVDGGIDGVTV
AAVRGFLSGIADLAPATRKRKRAAVAAFCRWAVRHDLLAANPMDKVDTITVPKTLPRPAP
AADIAKVFAAICARRPRKDVALDVLRDRVLFETAYVCGARASEVCELYVEDFDLRLDDEH
VRLHGKGGTVRTVLLDDRGYVAMLRLYLDRTGYTAGPMFRASINGRGGPLSYSAAHHRWS
RYCAAAGVDIDIHQLRHSHATELINAGVSIEVVRKRLGHASTETTQIYALLADQVADTEI
RAARRRRDRSL
Download sequence
Identical sequences A0A2A7U7Z8 Q5YM85
WP_011212388.1.78782 247156.pnf2210 gi|54027830|ref|YP_122070.1|NC_006363 gi|54027830|ref|YP_122070.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]