SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 264201.pc1462 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  264201.pc1462
Domain Number 1 Region: 543-863
Classification Level Classification E-value
Superfamily RNI-like 1.6e-49
Family Cyclin A/CDK2-associated p19, Skp2 0.051
Further Details:      
 
Domain Number 2 Region: 318-648
Classification Level Classification E-value
Superfamily RNI-like 2.51e-45
Family Cyclin A/CDK2-associated p19, Skp2 0.012
Further Details:      
 
Domain Number 3 Region: 193-268
Classification Level Classification E-value
Superfamily POZ domain 0.00000416
Family BTB/POZ domain 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 264201.pc1462
Sequence length 870
Comment (Parachlamydia sp UWE25)
Sequence
MYHLKMIQLIRVVILNIQNIRSNLSHFIVNTDTHFYIRSNDHLKFSERIVLLCKTIFQCF
LNLFFNYLKKDQLQSQWREVFWGQKEFVISNLAPTQSESGTFLSSPSQISDFALPFITAN
RNQETINYPKNENNLVIDSFNNSIDSNISNSHFPKTVDPLIIPPSQLSPSPQGVKLSFQG
GTSLTIPYSQLALLRKKSPYFKSLWSGHFQETLQGPLAITEKKFTNLLQCLMDANFKLSV
EDIPCSIALAHYYQLTDVVENLEKQLIKIYQSEEDALFNSNEESLIELKELLNFARLYQL
NNLINYLEFTVVSGLLNNTSHVNEFEKILNHFSTDIEELNLSGKDFFTEAHFLALKNCKN
LKVLCLKIFYTPIDTGLAHLTSLTALQNLDLSECYLLKDTGLAHLSSLTALQYLDLSGCD
DLTDAGLAHLTPLVSLQHLDLSKCENLTGDGLAHLTPLVALRHLGLSDCRNLTDAGLAHL
TPLTALKHLDLSECKNLTDDGLVHLSSLVALQYLSLKLCENLTDAGLAHLTSLTALEHLD
LGLDFGYCQNLTDDGLAHLSSLTALKHLDLSWRENLTDAGLAHLTSLTALKHLDLSWCEN
LTDEGLAYLTPLVALQYLSLKGSDITDEGLEHLAHLSALRHLSLNDCRRIYHGYGLAHLT
TLVNLEHLDLSGCYSLSSFKLIFLSSLVNLQHLNLSGCFGLYHDGLEDLTPLMNLQYLDL
SSCINLTDKGLAYLTSLVGLGLQHLDLSGCKEITDTGLAHLTSLVGLEYLDLSWCENLTD
KGLAYLTSFAGLKYLNLKGCKKITDAGLAHLTSLVTLQRLNLSECVNLTDTGLAHLVSLV
NLQDLELRECKSITDTGLAHYIQNQQIIYR
Download sequence
Identical sequences Q6MB63
264201.pc1462 gi|46447096|ref|YP_008461.1| WP_011176010.1.90613

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]