SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 264201.pc1920 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  264201.pc1920
Domain Number 1 Region: 211-511
Classification Level Classification E-value
Superfamily RNI-like 1.06e-53
Family 28-residue LRR 0.019
Further Details:      
 
Domain Number 2 Region: 84-159
Classification Level Classification E-value
Superfamily POZ domain 0.00000942
Family BTB/POZ domain 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 264201.pc1920
Sequence length 517
Comment (Parachlamydia sp UWE25)
Sequence
MNISNFGFNPSHLVNTTAPSYYPPQDINDQLENENTPLDNPLPNLEETSASTILASDLSP
SSKEVQLSFQEGTSLTISHSQLALLREKSLYFKTLWSGNFQETLQHPLALTKKEFTLFLN
CLIDANFKVPLEEVTSAIHLADRYVLTDVVKNLEEQLIEGYRSQRFEPFSSTEESLVELK
ELLNFTHRYQLNRLKDYLEFTVVSALLNQTSQLAEFERIINRFSKKIEALNFSENAYLTD
AHLLALKVCKNLKVLHLEACQAITDDGLAHLTPLTALQHLDLSQCRKLTGIGLAHLTPLT
ALQHLDLSGCDNLTDAGLAHLAPLTALQHLNLSDCENLTDAGLVHLSPLIALQHLDLSYC
WRLNYAGLAHLKPLTALQYLDLSHCINLTDAGLAHLKPLMRLQYLNLRYCENLTDAGLAH
LTPLMALQHLNLSECYHLTDAGLTHLTPLTALQHLDLSHCRSLTDAGLAHLTSLTVLQYL
DLSYCKNLTDAGLARLTPLTGLQHLDLSRCKNSLVMD
Download sequence
Identical sequences Q6M9V5
gi|46447554|ref|YP_008919.1| 264201.pc1920

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]