SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 266265.Bxe_C0039 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  266265.Bxe_C0039
Domain Number 1 Region: 50-131
Classification Level Classification E-value
Superfamily ACT-like 6.41e-24
Family Nickel responsive regulator NikR, C-terminal domain 0.00037
Further Details:      
 
Domain Number 2 Region: 1-43
Classification Level Classification E-value
Superfamily Ribbon-helix-helix 0.000000000178
Family CopG-like 0.0032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 266265.Bxe_C0039
Sequence length 152
Comment (Burkholderia xenovorans LB400)
Sequence
MQRITMTIDDDLLAIVDAMVEQRGYTSRSEAFRDLVRESQAREPAGAAGEQCVATLTYVY
DHATRDLARRITQAHHERHDLAVASMRVHLDHDSLLESSVLQGRSQEVAAFADSIASQRG
VRFARLHTIPVSIERARHHHGAASGQHDHLHV
Download sequence
Identical sequences Q13IX3
gi|91780109|ref|YP_555316.1| WP_011493226.1.38508 WP_011493226.1.45576 266265.Bxe_C0039

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]