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Domain assignment for 269084.syc1735_c from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  269084.syc1735_c
Domain Number 1 Region: 303-503
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 2.22e-48
Family Multidrug efflux transporter AcrB transmembrane domain 0.00000477
Further Details:      
 
Domain Number 2 Region: 837-1032
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 1.02e-42
Family Multidrug efflux transporter AcrB transmembrane domain 0.00000874
Further Details:      
 
Domain Number 3 Region: 570-675
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 5.23e-28
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0005
Further Details:      
 
Domain Number 4 Region: 42-134
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 3.49e-25
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00013
Further Details:      
 
Domain Number 5 Region: 139-185,280-336
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 2.14e-22
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0018
Further Details:      
 
Domain Number 6 Region: 728-813
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 1.57e-21
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00054
Further Details:      
 
Domain Number 7 Region: 186-278
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 4.97e-21
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00036
Further Details:      
 
Domain Number 8 Region: 679-727,814-853
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0000000000012
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 269084.syc1735_c
Sequence length 1056
Comment (Synechococcus elongatus PCC 6301)
Sequence
MLLSIANIFIKRPVLTTVCSILITLGGLVCLPILPIEQLPDIAPPQIQVSATYVGADAET
VENTVTSILENQINGVEGMEYITSTSAIGQSSIQVYFDPTRSPDLAQVDVNNLVSVAIPQ
LPQAVQQQGIAVTQSSPSILQFYTFSSPTGEFDAQFISNYLSLYVQPALARVKGVGQANL
FGNLEYSMRLWLDPNRLASYGLTAEDVASALQSQNQIIPVGQVGGPPVNSDQAYTFILRL
QGQGQLSTVEQFNNVVLKTGEDGTLVRVKDVGRAEEGAQSYSVTLAADGRPGVGLGIYQL
PGSNAIDVANGIREQLAILEQQFPPGLEGKLVFDVTDFVNASLSEVLITLVQAIALVILV
IFIFLQDWRTTLIPAIAIPVSLVGTLAFIQAFGFSINLLTLFGLVLATGLVVDDAIVVVE
AITEKIEEGKTPLQASIEAMDILFGAVIATSVVLFAVFIPVAFFPGATGRIYQQFALTLT
FTILISTFNALTFSPAMSALLLRPAKQQQGWLGKFFNLFNAGFDRVRIGYSKALAIIDRL
KFLVIGLFAAGLALTGWLFTTTPTGFVPTEDQGYFLGLIIGPEGAPLNYTQKVGQKIQSI
LETEPSVTSTAVISGFSFIGQGNNLGIYFASLKPWDERKAADQSAEAIVGRINQKLFEGI
SEAQVRTLLPPAIPGFAAYGGVQFLITDQTGGALSVSQFLESVNKIIGLARENPITRQTF
TPFTANSPQIEIDVDRDRLAALNIDFGEALQTLGSYMGGQYVNQITQFGRSYQVYIQADN
GFRATPQALTQIYVKSRDGATVPLSEFLTIRQQVGPLYITHYNLFRSIEVDSFAAPGTST
GQVIEGLKDAFQKANFQRFGNGLVGLAREEVSAGTLAPLIFGLGVVVVFLVLAALYESYV
DPLIILLTVPLAILGALVFLNLRGIPLDVYAQVGLVMLIGLASKNAILIVDYANEAVAKG
MGYTEAALEAAKLRFRPIVMTAISSLIGFFPLVIAQGAGAASRWSLGTVVFGGLLVATVL
SLLIVPANYVILKSITRRFFSKKRHDPETGQPELTS
Download sequence
Identical sequences A0A0H3K3Z1
WP_011244045.1.5740 269084.syc1735_c gi|56751744|ref|YP_172445.1|

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