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Domain assignment for 269796.Rru_A3785 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  269796.Rru_A3785
Domain Number 1 Region: 295-488
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.96e-49
Family Ribonuclease PH domain 1-like 0.0000184
Further Details:      
 
Domain Number 2 Region: 4-145
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.57e-48
Family Ribonuclease PH domain 1-like 0.0000215
Further Details:      
 
Domain Number 3 Region: 146-237
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.54e-28
Family Ribonuclease PH domain 2-like 0.0013
Further Details:      
 
Domain Number 4 Region: 450-548
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 2.95e-26
Family Ribonuclease PH domain 2-like 0.00016
Further Details:      
 
Domain Number 5 Region: 554-640
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 2.01e-22
Family Eukaryotic type KH-domain (KH-domain type I) 0.0027
Further Details:      
 
Domain Number 6 Region: 620-694
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 3.12e-21
Family Cold shock DNA-binding domain-like 0.0005
Further Details:      
 
Domain Number 7 Region: 242-321
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.00000000000000199
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 269796.Rru_A3785
Sequence length 708
Comment (Rhodospirillum rubrum ATCC 11170)
Sequence
MSLFNVFRKEIEWGGRKLVLETGRIARQADGAVMASLGDTTVLCTAVGAKTKSKFDFFPL
TVNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVHGYKNETQLVCTVLC
HDLENNPDIVAIVGASAALTLSGLPFLGPIGAARVGLIDGAFVLNPTRDQMADSVLDLVV
AGTREGVLMVESEAHELSEQQMLDAVMFGHEGYQPVIDAIIALAEQCAREPRAIEPPAPE
AEAVAAKVREVGEAGLRDAYKEADKMVRHDKVDAVRDAVTAAFAGDDAALALAGAAFKDL
EKDIVRGSILDTGLRIDGRDTKTVRPIEIYPGILPRAHGSALFTRGETQALVTTTLGTGQ
DEQIIDALEGEYRENFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPMMPAKDA
FPYTVRVVSEITESNGSSSMATVCGTSLALMDAGVPLKNAVAGIAMGLIKEDERFAVLSD
ILGDEDHLGDMDFKVAGTANGITSLQMDIKITSITKEIMNVALNQAKDGRIHILGEMTKA
LGNARSDVSDFAPRITTIKVPPQKVREVIGSGGKVIREITEVTGTKIDIEDDGTIKIASA
DAEATQRAVDWIKGIVAEPEIGVVYTGKVVKIMDFGAFVNFLGTRDGLVHISELSQDRVK
KVGDVVNVGDQVKVKCVGFDDRGKIKLSMKQVDQVTGADLSTQAPAEE
Download sequence
Identical sequences Q2RMR6
WP_011391532.1.3410 YP_428866.1.57063 gi|83595114|ref|YP_428866.1| 269796.Rru_A3785 gi|386351881|ref|YP_006050129.1|

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