SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 272559.BF0868 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  272559.BF0868
Domain Number 1 Region: 208-351,398-486,516-846,929-973,1014-1103
Classification Level Classification E-value
Superfamily Porins 4.4e-84
Family Ligand-gated protein channel 0.0043
Further Details:      
 
Domain Number 2 Region: 129-210
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000000000000085
Family Carboxypeptidase regulatory domain 0.07
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 272559.BF0868
Sequence length 1103
Comment (Bacteroides fragilis NCTC 9434)
Sequence
MKKCNQKWFNPQKVKKQIAIAVAISLVCAIPISTFAQVLKFSIKKSNTSIQSVLQELEKE
SGYTFFYNDNQVKLDKKISINIEDASIEVVLNQIFENSGYSYRIVENQIVIYTTPTTTVQ
QTVQQKKQQKVTGVVKDIAGDPIIGASIIEKGSSSNGTITNVNGDFSLIVTGNELQVSYI
GYIPQTINLKPGVSSYNVIMKEDTKTLDEVVVVGYSTQKKESLTGALQTVKSDKLKDITT
PSVENMLNGKVPGVYVAPGSGQPGSGGAVVIRGQATLSGTTAPLWVIDGVIVGSNAGALN
PSDIETMTILKDAASTAIYGSQGANGVILVTTKNGKAEKMTVNVSAKVGISKLGRGNMEM
MDGAELYDYYKSFSNQEAITFSRYNDKLRNCNFDWFDLAAQTGVTQDYNVSLSGGNEKIR
SFLSIGVYDEEGAVKGYDYTRYNFRLKTTYKPFEWLSIKPALAGSRRDIEDKQYDVTSMF
QRLPWDSPFDEEGNLVPNRYTGWVNSSNSNYLYDLQWNKSNSTNYEFMGNLDFDIRITDW
LSFSSVNNYKYIGYNYSEYTDPRSSSGEGVDGRMREYQTTTVRRYSNHIIRFNKMFGKHS
INALAAYEFNDYWAKATDMYGIGFIPGFEVLDVVAKPEKVGGSISEWAVQSLLFNANYAF
DNKYLAQLSFRRDGASNFGDNAKYGNFFSISAGWNINREKWFHASWVDILKLRISYGSVG
NRPSSLYPQYDLYSVSSKYNEESGALISQLGNKDLTWEKTYTTGTGIDVAFFDNRLRASF
DWYNKYTSNILYAVPISGLVGVTSMWKNIGEMQNQGFELSIGGDIIRTKDWDWNIEINLG
HNKNKLKKLYKTKNAEGQFVEKPIIISDGTSIAGTAKRVLQPGYPCDTYYLKEWAGVNPE
NGAPQWYKTVENEDGTLSRQKTSNYSEADQVKCGSSSPDIFGGFSTVLRWKDIDLNAVFG
YSVGGQIYNYSRQEYDSDGAYNDRNQMKLQKGWNRWEKPGDIATHPVASYSNTSKSNSSS
SRYLEKNDYLKLRSLSIGYNLKLPQYYINNMRIFFTGENLFCVTNYSGVDPEIPASDGSV
IGTALPSVYPTVRKFMFGLNLTF
Download sequence
Identical sequences A0A015W4A0 A0A016G325 F7LLH6 Q5LGX5
WP_009291659.1.37988 WP_009291659.1.58084 WP_009291659.1.60699 WP_009291659.1.6251 WP_009291659.1.78347 WP_009291659.1.81678 WP_009291659.1.95750 gi|60680419|ref|YP_210563.1| 272559.BF0868

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