SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 28377.ENSACAP00000004249 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  28377.ENSACAP00000004249
Domain Number 1 Region: 407-614
Classification Level Classification E-value
Superfamily PUA domain-like 2.49e-75
Family SRA domain-like 0.0000000151
Further Details:      
 
Domain Number 2 Region: 1-78
Classification Level Classification E-value
Superfamily Ubiquitin-like 9.21e-18
Family Ubiquitin-related 0.000056
Further Details:      
 
Domain Number 3 Region: 703-770
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000000454
Family RING finger domain, C3HC4 0.013
Further Details:      
 
Domain Number 4 Region: 320-376
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000109
Family PHD domain 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 28377.ENSACAP00000004249
Sequence length 783
Comment (Anolis carolinensis)
Sequence
MWIQVRTIDGAQTHTIDDLSRLTKIESLREKIQESFRVSPERQRLFYRGKQLEDGHTLFD
YNVGLNDIVQLLIRSESDAPTISLTNKDGKPSPCNVSNCKNKVTQGINSGSSNLPSTSAC
SFLIDPGIGRYKINELVDARDETIGSWFEAHIENVTQVPKGHKNGKAQGKNYMDNGEDTI
YHIKYDEYPESGIEMAVRNLRPRARTILKWNELCVGDVVMVNYNVDSPEERGFWFDAEIT
SLREISRTNKEVHAKIMLGGPEDAINDCKLLFIEEIYKIEKPGALLSLVYDFFKAFALIR
NIRKSGPECKHCRADPDKECRFCSCYLCGGKQDAHMQLLCDECNMAYHIYCLNPPLSKIP
EDEDWYCPSCKNDSDEVVKAGEKLKQSKKKAKMPSACTDSQRDWGKGMACVGRTKECTIV
PSNHYGPIPGVPVGATWKFRVQVSEAGVHRPHVGGIHGRSSDGAYSLVLAGGFEDEVDRG
DEFTYTGSGGRDLSGNKRIGEHSFDQTLTHMNRALALNCDAPLDDKNGAESKNWRAGKPV
RVVRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEIGKCGFLVWRYLLRRDDAEPAPWTTE
GTERSKKLGLSLQYPEGYLEAMASKEKKDKIKKQPMKQEPTEESNGNQKRPIDDATVTPM
KMEDGEKVEAFDLTQQQQWLIQEDSPNQKVWDEVLVSLKEGPNFLKKVEQSFMCVCCQEL
VYQPVTTECLHNVCKSCLQRSFRAEVFTCPACRHDLGKGYTMIPNKILQTLLDQFFPGYS
KGR
Download sequence
Identical sequences 28377.ENSACAP00000004249

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]