SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 2850.JGI48750 from STRING v9.0.5

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  2850.JGI48750
Domain Number - Region: 737-778
Classification Level Classification E-value
Superfamily Helical domain of Sec23/24 0.0128
Family Helical domain of Sec23/24 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 2850.JGI48750
Sequence length 930
Comment (Phaeodactylum tricornutum)
Sequence
MSRRRDGFAVLRPVSRAVPSSRTIRDDSRLPDALVVTPVVVVPAAEPVPDDGVPPLLTAV
PKCERCGAPHPDHVTHFGPSTPALLLCFLCGHHQTHQASSSATIPSSSVSGSSSASQSSS
CVFTLPLRWPPSLDSSPPTPSYRVPARACPPLWFLVLDGSCHERSYWQAVTQVLSEILQP
ANDNSADTTAPPEHVHVSILLAYTTTSGTNDDNNAHHTTHTPNNTPNNNPNNTPNNTHNV
LAVWQLDSPYPHVQHRSSAEPDADDLLRHLAHSPVPLDGAHVPHVHAALRTLLDYVPSTP
DARFPLAWTVRAVQATLDEYGHAAGLRENHNHHDNHHHHNNNHHDTTRLPYAGAKLTVLL
GSRPTGISQRVRKHDNSVGLGGVGGRIGNSPGQRFPTPQPQRGKHQPDLTPSALQEYYQP
TTPSVEVEYSALGRACARVAMGVDVLCLVTEPSQSKADTSPHTFVPPTDFGIALWSSLTD
TSGAPGPLLLDVTTETGRERLQREIQARVPWNPALVFGGELRLRLPAGYAVDETVTASPT
ATNDHPDDTDGPQLAAVFYKAGLSGPASAVQPQLWKLGTADPYTTLAIDLKLEKDTIPHR
LHVPGLGEVSLPPTLQTCFAYTRIVHHAPTNQYETRREIRIASIRLPLARTVEALYDNLD
PEALAVVLFHKLALAGLQDGVAEIPVVASAWLQSLLASAYRSAVEQDRLETELHEQGLEP
DGKFHAMQRAPAAPDRPLMTYLLLQSDALRASGSPSLDQRMAALLQMASMPPEVLTRCIA
PRIQLWASGAEDDEPLVDVLELRSEDIQMAVMEQSQTQRELILLIDTPDQTTVLDARYVN
THVKDGTAKPLVVGRGLRHAIAETAVSYRTPPTIVYELDQTSTGGERTFARLLDALVEDA
PSPDGHENYDGWKRDVAAAVLEELEKDEFD
Download sequence
Identical sequences B7G889
jgi|Phatr2|48750|estExt_fgenesh1_pg.C_chr_190053 2850.JGI48750 XP_002183301.1.39622

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