SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 288000.BBta_6830 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  288000.BBta_6830
Domain Number 1 Region: 3-230
Classification Level Classification E-value
Superfamily NagB/RpiA/CoA transferase-like 2.55e-88
Family CoA transferase alpha subunit-like 0.000000439
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 288000.BBta_6830
Sequence length 242
Comment (Bradyrhizobium BTAi1)
Sequence
MNKVYPDAKSALAGLLKDGMTIMSGGFGLCGIAETLSDAIRDSGVKDLTVISNNAGVDGI
GLSRLLETRQIRKMISSYVGENKLFAQQYLAGELELEFCPQGTLAERIRAGGAGIPAFFT
KTGVGTLVAEGKEVREFDGEKYLMERGLFADLAIVHAWKGDTAGNLVYRKTARNFNPMMA
TAAKVTVAEVEHLLPAGQIDPDHIHTPGIFVKRIVHVGTALKRIEQRTVRKREAAAAAGE
EV
Download sequence
Identical sequences A5ERC3
gi|148258038|ref|YP_001242623.1| 2005399932 WP_012046653.1.57540 288000.BBta_6830

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]