SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 294381.B1N4D7 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  294381.B1N4D7
Domain Number 1 Region: 403-635
Classification Level Classification E-value
Superfamily NHL repeat 9.94e-16
Family NHL repeat 0.0021
Further Details:      
 
Domain Number 2 Region: 134-170
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000198
Family B-box zinc-binding domain 0.0066
Further Details:      
 
Domain Number 3 Region: 5-69
Classification Level Classification E-value
Superfamily RING/U-box 0.00000343
Family RING finger domain, C3HC4 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 294381.B1N4D7
Sequence length 672
Comment (Entamoeba histolytica HM-1:IMSS)
Sequence
MNKREEKIVCCICNVGFGIPEFPKLLPCMHMICRDCLFQVIMAQTSRQDYSDSESEIYCG
MCQKYVHIPYCDLDDLPTVFKLIQNKAEQTICCEEECYTKGFSYCYECNVIYCENHIEQH
IKANPTHKFEVFNEGKYCLKHHLTKTYYCYTCNEILCPECYMLDHSGDDVGKYLDHLSKF
YTHDQFNINKRVYTLSQNVRRATEIYDSFYFSQQPMIDAQLTTSSTQIKQLISQKLNELK
KGGKPLTNVGKIVNELANEFRIKSPICPSLSTIKTTTNLIPLKGTIDIDLYFYDVYEKPT
LTSDIALTLVPILHILPGSTDYLKEINHDLADEIAENGGEASAFIKEVGKGRIRITIKGE
SKGDVCLRVYVHKVEIGASPLTFHVIEVPKKVCCSNKDRNVCCISSMCTLQSGAYVISDR
NNHNIKIFDGNNIAVAGGFGKNNGQFKLPIGVTSCVVDGKEIIAVTDTLNYNVQLFNSVG
NHIKTLGRSGPLLNGCLLKPSAVAISNNKQTVYVADSKYDIVQGFPINGQPKIIVQKKNI
GEFHIVDLDIIETESKTELVILDSLNHRLILFNVDDETYKVKGKYDDCDRRGHFFFPISV
AVNHKKNDIYVLDSDNRIQQFNYDLSFIGMFKYPSEPIKKIYYSSSLNKMLLCYGTDYLQ
EIPLETINFYLN
Download sequence
Identical sequences A0A175JWX0 B1N4D7 M2QF45 M7WQX4 N9V0C0
294381.B1N4D7 gi|169800987|gb|EDS89171.1| gi|183234634|ref|XP_001914053.1| XP_001914053.1.49425 jCVI|EHI_025870

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]