SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 294381.C4M2X0 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  294381.C4M2X0
Domain Number - Region: 514-565
Classification Level Classification E-value
Superfamily DNA clamp 0.0471
Family DNA polymerase processivity factor 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 294381.C4M2X0
Sequence length 998
Comment (Entamoeba histolytica HM-1:IMSS)
Sequence
MKHLLVNYRSDGVVFENLRIKDYFSIEYTSYKLTTQKLQGEVIQTFQLSELMGFIKIENI
NFAIVIQESKETCSLQEKKILEVLSIDLLPILPIEQWKSTSSFVKEEVSKVKEMLMTFKL
YYSYDLDITLTLQNQQETTFTDPRFFWNESLVSILQPYFAHWIVVFMDGFIKSIPLISSS
SKNIQYILISRRDKTRAGLRFSSRGADSSGNVSNFVETEQIITDGITNSSFIQIRGNIPL
IWKTKEKDLFKPRGKFVEDSRQNDVLIKHFNMLKEMYGEITVINLLNNNGDEKELHDMYE
LFVKANLLPIKYFGFDFHKICANKKYQNIEIIMEEIKPILEKNKFYFNNSKELFNQLGII
RTNCIDCLDRTNVIQSSIAKYLLSKQLNLILGNKTLLPLNSLISNSELTNFMNLWADHAN
VMSYRYTQTDAMKTDFTRKGKREIKGMINDGLISVQRTIISVKTDQYKKPQETLDFIMGK
IIFDQENMNEKCNNVLLCIPKAIKYRHNIKIQDTVHLHLDSSFFKEYNYNSKLTRTIPIH
DIVRCEMCEENPQQIIILCATDSKALKYEIPSIVEAHSLMNIIGINTPNSTPILINRSST
FISNQITKNITISCIQWKLNKINQIPSQIEIMEFVKEIQSSIVDIVLYNTSFPIQLNHIN
SVTPGILLLMEIIKELSHQQPNKYEIFAVKETGVIVHCILVLKEQIHVLSNLFYSKVYTS
KNKSNEKPKIVGIAFTFNIHQTSIGLVALDLNNEINDKLFLKGNIELPLTTNHLFFITQK
RQVSLNELLNRCENIMENQKGTFLYYRNQWNFMNCSSNDLFKYPTIQTIQNYLTNNYFAW
TGSIPYVEIPNKTKIRFQLVIKFNSLENIKFDSKEISLTFISKYLQQITESKLSLQQITQ
GQSVINLKLMQFPQPFLALGIIQIKILDGSSLYKGIIPMNVVLLKNLNYSCHLFSNSLHM
GNWNMELSIVACREFSVRLGNGFTTPPINSSMNLPLTP
Download sequence
Identical sequences A0A175JQA1 C4M2X0 M2S606 M3UQM1 N9UTD8
XP_652720.1.49425 294381.C4M2X0 gi|56469602|gb|EAL47334.1| gi|67473942|ref|XP_652720.1| jCVI|EHI_048570

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]