SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 294381.C4M4Y5 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  294381.C4M4Y5
Domain Number 1 Region: 341-533
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.42e-17
Family SPRY domain 0.011
Further Details:      
 
Weak hits

Sequence:  294381.C4M4Y5
Domain Number - Region: 221-274
Classification Level Classification E-value
Superfamily POZ domain 0.000188
Family Tetramerization domain of potassium channels 0.03
Further Details:      
 
Domain Number - Region: 108-137
Classification Level Classification E-value
Superfamily Ribosome binding protein Y (YfiA homologue) 0.0589
Family Ribosome binding protein Y (YfiA homologue) 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 294381.C4M4Y5
Sequence length 538
Comment (Entamoeba histolytica HM-1:IMSS)
Sequence
MNCKEQSELIQRQRQEIAVIREEVDNKLDNLQEALKVNEKTFLEMMILEGNSKLRIVENI
KQNIPQTEDTVIATNQLDELLQGFLQMHKDGSSKIEQILEGVVNDFNRIKTDMLISIDVS
LRSMEKRLKKYEEKFKEIERFQKSLGSFNPKEITIEFTDGEGTIDESVIQSDRCQNSFFA
KYISFKQEPKEDGLDEIKEQNEESQNEEKTVTEETELDKIEKKKIKINRSKELFKYVLMY
LTEGEVICNDKSLNEIQAIVKELMEYGINSDDIYFSMKKCVNAFILSHNELTIKEICTSI
NLQDYEQLFVLQKSSLDCGEFEKKIFDLVLSKQTIKSAQAIINNMVFNGEVHIEKIHKKE
LIDFIVSSLPKRDSIKFKVSNGGMLVSGTTITNKLHKQFSTAMIPEQVSAYTIRVGAPGK
SGICNAMYVGFTYATPDTIPVGQQWVKMGYYMSIYNGNLYSEKITPNTPNHQYYNSEITM
EDSVVCWYSKEDKAIGFIINGVLLKPAFVGITQTELYPIVVMYEADQSFIFDSFIPLK
Download sequence
Identical sequences A0A175JSW2 C4M4Y5 M2RMS4 M3S822 N9V8U9
gi|56466855|gb|EAL44872.1| gi|67468443|ref|XP_650258.1| XP_650258.1.49425 294381.C4M4Y5 jCVI|EHI_119370

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]