SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for 29760.GSVIVG00020888001 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  29760.GSVIVG00020888001
Domain Number 1 Region: 206-440
Classification Level Classification E-value
Superfamily PH domain-like 6.88e-77
Family SSRP1-like 0.00000676
Further Details:      
 
Domain Number 2 Region: 550-634
Classification Level Classification E-value
Superfamily HMG-box 3.4e-27
Family HMG-box 0.0000791
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 29760.GSVIVG00020888001
Sequence length 644
Comment (Vitis vinifera)
Sequence
MSEGHLFNNISLGGRGGTNPGQLRVHPGGILWKKQGGGKAVEVDKSDIVGVTWMKVPRTN
QLGVRVKDGLYYKFTGFREQDVTNLTNFFQHSCGLNPEEKQLSVSGRNWGEVDLNGNMLT
FLVGSKQAFEVSLADVSQTQMQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENRPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVMQFETDYVVQSELSLS
EELLNSKYKDKLEPSYKGLIHEVFTLILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDVQTADGVAAVLQNDDDDAVDPHLERIKNEAGGDESDE
EDEDFVLDKDDGGSPTDDSGEEESDASESGGEKEKPSKKESKKEPSVSKASSSKKKPKDG
DEDGSKKRKQKKKKDPNAPKRAMSGFMFFSQTERENIKKSTPGIAFTEVGRVLGDKWKKM
TAEEKEPYEAKAQADKKRYRDEISGYKSNPQPMNVDSGNESDSE
Download sequence
Identical sequences D7SX63
29760.GSVIVG00020888001 XP_002282538.1.54126 GSVIVT01011349001

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