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Domain assignment for 298386.PBPRA1439 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  298386.PBPRA1439
Domain Number 1 Region: 545-696
Classification Level Classification E-value
Superfamily Nucleotide cyclase 1.02e-31
Family GGDEF domain 0.0009
Further Details:      
 
Weak hits

Sequence:  298386.PBPRA1439
Domain Number - Region: 303-353
Classification Level Classification E-value
Superfamily HAMP domain-like 0.00405
Family HAMP domain 0.017
Further Details:      
 
Domain Number - Region: 404-539
Classification Level Classification E-value
Superfamily GAF domain-like 0.0451
Family GAF domain 0.011
Further Details:      
 
Domain Number - Region: 265-301
Classification Level Classification E-value
Superfamily Preprotein translocase SecE subunit 0.0484
Family Preprotein translocase SecE subunit 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 298386.PBPRA1439
Sequence length 700
Comment (Photobacterium profundum SS9)
Sequence
MRMKLRLKYSLASLMIFIAVIPAVIVGGLLLKQQTEIETNYQREKLERLSSTLRQEFNYR
FYVLSTSLDVLSRDRLLVQAMDDFFLTSHVRETLEPLVSKVPLVESAYLIDSDWEEVENY
NGITSQSNFNEIMRYLDEQYEKKLLENGYQWLFTYVDKNLVLNEDNPSDDGLIVVDPIYS
SVLSDGLQRKPVGYLVVVIPTENISKMLKMYLTGDEKVTFLRNEKEILNIKSDGSLGSNG
LLTLNQKIKIDSDLISNPLEYEVKISMDKKPEEDKFTHSLQIISIVGICMVIVGIFGAAI
TYRWVTRPLAALMVMVRSYSRGDYDQRERKLRFSEFYQVGELFHEMATTIEEQLEDLASK
NTELKQANNQKEKYNRQLINFNDKLEKKVEEKTEELTLSLEREERRRDILKSLLAFSSKL
QQDDIKSVVLAQVSSLYPEAHWALKLSNIDNNQWQSDGIDESVLSKVDAVQNKAEYFFVP
EIKLLHCFNLIDSSGQLLGRLVMKNEKLARTDLEIVSLFARQLSSTIEGRILNAELERIA
VTDALTELPNRKAFDNDFKNNTERLKRYPERQFGLFIIDVNKLKQVNDEFGHYVGDELLK
AVSELLIGACRQTDRVYRLGGDEFAILLEEGSEQACCQLATRLEGVRGHTFTQIETGELL
PIHFALGWLSSENIPPEKMFQAADKAMYEDKQAYRSSDQL
Download sequence
Identical sequences Q6LS76
WP_011218173.1.54600 gi|54308632|ref|YP_129652.1| 298386.PBPRA1439

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