SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 29883.JGI334204 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  29883.JGI334204
Domain Number 1 Region: 69-138
Classification Level Classification E-value
Superfamily F-box domain 0.0000785
Family F-box domain 0.006
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 29883.JGI334204
Sequence length 609
Comment (Laccaria bicolor)
Sequence
MPNPPPEIPSVEPLQLQSVTRGIIAETEERIVHLEEMDRRSLEVRQTILRRLEEYRRFVF
YQISLVAPIRRLPTELLSEIFAIYVADDIKTSSGMLRRQWSLAQVCRRWRHVVLNTPRLW
NRPPRIYAGMTHEVDPSSVKTHFARAGGLPLSIDVSINLGACAKPSRLLATLINNTSVFS
LAPQLRGVSFMSKRVLCGDQFSRLVLPWSQLKTITINLPNLDYAWKVFSNAPHMETCTFT
KIVNNGTPHGIVRHMDLQQLLLKGCQDGPAFPIALFDTLVLPNLINLLIEFDNLTIDPIT
SLITRSGCSLSKLILNCPIVRGSLLKLLEETASLIHLEVHALSQADIKGLTVSKKNGNQP
ITPSLSEIHIANVNAITGPSSINTLIRSRARVNPKISDVKPIQRIHLYFKSDHLSQEMYG
RFTGLPWMPYSEPESADGTVEWAKSLREIIARLRPPPPHQDWFSLWDILTEMEHWEAIKQ
PYLAMVEQPDTYDTMHRIRIRHFVKMIVNNRNVASQNINDAESSTFTKRRVIVLISQSTP
NGTSNATSSSKVVKRVALDGGISHDGHDARRAAFHPLPRHVFSLKRCVVRYVYVSIVVLD
SVVIPMRGS
Download sequence
Identical sequences B0DYG3
XP_001888939.1.58555 29883.JGI334204 jgi|Lacbi1|334204|fgenesh3_pg.C_scaffold_60000052

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]