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Domain assignment for 300269.SSON_3310 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  300269.SSON_3310
Domain Number 1 Region: 21-167
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 1.06e-50
Family Ribonuclease PH domain 1-like 0.0000141
Further Details:      
 
Domain Number 2 Region: 324-515
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 2.89e-46
Family Ribonuclease PH domain 1-like 0.0000178
Further Details:      
 
Domain Number 3 Region: 168-258
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.96e-31
Family Ribonuclease PH domain 2-like 0.001
Further Details:      
 
Domain Number 4 Region: 473-571
Classification Level Classification E-value
Superfamily Ribonuclease PH domain 2-like 1.82e-27
Family Ribonuclease PH domain 2-like 0.0000875
Further Details:      
 
Domain Number 5 Region: 249-348
Classification Level Classification E-value
Superfamily Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 1.2e-25
Family Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.0012
Further Details:      
 
Domain Number 6 Region: 631-716
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 4.97e-23
Family Cold shock DNA-binding domain-like 0.0000219
Further Details:      
 
Domain Number 7 Region: 577-645
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.37e-17
Family Eukaryotic type KH-domain (KH-domain type I) 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 300269.SSON_3310
Sequence length 734
Comment (Shigella sonnei Ss046)
Sequence
MRRRSGINTSAVRYCLRKRKDITLLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDD
TAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDR
PIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYI
NDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQ
NINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSET
IATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRT
HGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPK
RREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPI
KAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKE
IMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIR
ALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGA
FVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQ
PAAAPEAPAAEQGE
Download sequence
Identical sequences A0A0F6C9D6 A0A0F6FCN3 A0A1S6TG31 A0A1S9J1Y2 A0A1S9K493 A0A1X3IXR9 A0A1X3KYE5 C3SSR2 C8TXG1 D3QSN6 D6IE81 D7XN20 D8A8V5 D8EB42 E1J0F8 E6BFL8 E9TGV2 F4VJG9 J7QR81 V0AAH8
gi|387884350|ref|YP_006314652.1| gi|74313701|ref|YP_312120.1| PNP_ECO57 gi|291284540|ref|YP_003501358.1| gi|260845979|ref|YP_003223757.1| gi|218701935|ref|YP_002409564.1| 155864.Z4525 300269.SSON_3310 386585.ECs4045 409438.ECSE_3450 585055.EC55989_3584 585057.ECIAI39_3661 585395.ECO103_3913 gi|15803706|ref|NP_289740.1| gi|218696871|ref|YP_002404538.1| gi|209920641|ref|YP_002294725.1| gi|15833299|ref|NP_312072.1| YP_002409564.1.10275

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