SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 3055.JGI174530 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  3055.JGI174530
Domain Number - Region: 51-82,117-184
Classification Level Classification E-value
Superfamily POZ domain 0.000746
Family BTB/POZ domain 0.049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3055.JGI174530
Sequence length 657
Comment (Chlamydomonas reinhardtii)
Sequence
MQEFFDEGINLNVARAICGLFDNASGSDCIIRFEVSNHTDNDGTPHAKRRRMDGDGRDVC
RELRAHSFVLEHASEFFKVKLSTDVGRTEEAGVPSPSQRRLPPAAGLQPASTHHARHSPS
HTPVLVVPVESPEEAAAARAVVAFCYTGRVSLPPTAGVRAALQVARQAAYLQVQGCEMAA
LDTLSQLLYRTRAPSKPAANRTLAAAAAAAAAAVGLGGSGAAALRASSPAGACAADAAAT
AAPGGGGDAAGGATAASAALPPPLEFFTCSDLWLSADTASGQVYARFRDLTAVAAERMVE
HFGDALKVFNDDELFEQFMALPATAVGAVLSCSRFGADCENTILHLLARRGRVGNTGVPD
RIQESWECCSCVGDWGAGGWATTTPPHPPPTARSFAESDRPGASPPEGGDATAGDGGAAS
EAGTTGSGAPPLGWFPITPAEAAFVANLAAARSEPERQALIAAGSRRFGRDTIASGWYSP
GRRQQYLSGGGGGGGRMYEWSISRSDLEEELEGKAPGERFLVESQDEVAARGFVWVPYVK
GKVGESAAALFLRASLPAAFEVPGSALNEGLTPAVMPLDAEMSVQRVVGDVRLRFWADGD
VWVLGKGRGHKALPLRAGVGAGAGAGEEEGVLAPWGEYLRDGDIRGTLTILPPSDLV
Download sequence
Identical sequences A8J3M7
XP_001695846.1.80978 3055.JGI174530 jgi|Chlre4|174530|fgenesh2_pg.C_scaffold_28000130

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]