SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 3055.JGI410267 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  3055.JGI410267
Domain Number 1 Region: 780-810,987-1040
Classification Level Classification E-value
Superfamily POZ domain 0.000000000222
Family BTB/POZ domain 0.052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3055.JGI410267
Sequence length 1174
Comment (Chlamydomonas reinhardtii)
Sequence
MSRKQVAEFRHGLEWRPCPTPASSAPGTSDPAPASCRTLVVLLPWMWAAGTSVDKHVALY
HGLGCDVALFHWPPLAVWLPLLATRNAMALLQGLAAHLAEQEQQQLEGNSPMKQHQRRQH
QQEQERPPSGAWHEAAGQHGAGQQPARVIRIRRPHVVLVSYSGAAKGLLAPALERLVAAA
AVADGTRGGGAVSVGMEWPGAGVIGSSGDTGCIGGSSTGGSGSGSAESAKRRRQLPPPPG
GPVGDAERVVLRHLAGVVFDSGPVDFDSSVGVTLFANSKVPAVRQLQRAAGGAAAGAMDF
FMYEPYALSHGDCCAVFEPLSGAAYFSDGLALMRLDGADEVALVAGSHGEFGNEDGVGPA
ARFQVIVALAVDGRGHIYVADHDVIRRVAVAGSSSAAAVALLQFSGGASRNSANSSHSQQ
QRGATAAAGAGGGGNLDSGGGGNGNGGGGSGSDSRSAGSSECGGAAAYGVVTTLTNGRAP
DGQSWWALSYDVAAHALIAATRTEVFRIPLPAVAGGRPPSSAPRPLAGGVWGRADGVGAA
ASFASVSCLVAVGVEGVVLAADAGLLRRIDPRGRVATLPLVSAPSGSSIDGSGGGVGGNS
TGGGGGGAPAQLPKKPTAMAVLPQGCVAVCAGGGGRLVLVWPPLPQLPGSSAAAGAEGKG
GNKHQKQQHRKHHELGSSKSSHLATIPSGDLSTHTTAGAAGRACGAAAASHASPAAAAAA
ATAFGSLISTSTGSGSSAATTAPLTPLLSPATSVAAPPLLAELLSQASAGSGGAGGAVTV
TVRVGPTRRAFVAHRSVLCAYSEYFRELLLPSPQSPKVQKGELLQPAAAAGEAASGEAAA
GATAEAPATPAEARADAAGAGDGGSGDGSCDDEPRQKRNGSSGGSNSREAQQPQTPQAGR
RQLTRSSSAGAAGLGGGGGGNRNSPDGGRRNGSGGSSGAAAVADEPPASQALPQSTEGPD
PASQAGAPATATAATATTTAVSPEPAQPPPPPPPQEVELLEYDADAFAVLLSYMYSGVLL
VPDGLVRPAAELTSRLRMAAAAAELQRRLVPAATPGTVVEDLLWAEKHGLTQLLAALKAY
FLEHRRQVAAAAPEALRRLARGSPELTAELLLAQDNEALGQGPAQGQAAGVGGGAGGGGG
GKGGKVGGGGAADGGMKKGKKGKEEGTGCACIVS
Download sequence
Identical sequences jgi|Chlre4|410267|pasa_Sanger_mRNA16849 3055.JGI410267

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]