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Domain assignment for 309801.trd_A0679 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  309801.trd_A0679
Domain Number 1 Region: 26-248
Classification Level Classification E-value
Superfamily Pectin lyase-like 9.58e-21
Family Pectin lyase 0.071
Further Details:      
 
Domain Number 2 Region: 201-375
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000000000000942
Family Pectate lyase-like 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 309801.trd_A0679
Sequence length 401
Comment (Thermomicrobium roseum DSM 5159)
Sequence
MARWRQVLHWLSGWREPRPGLTVTGSVVLEPGHYDLPDPGDGALRIAADDLVIDGRGAVL
DGRGRGGIGILLQGRRRVVIRHLAVRGYDWALLALDCEEIVVEDCNFSHNGASEGTFLDI
TRPDEGAGGGIRSIRSSNTRIARLVAREQDIGIDAIASHGLVVTDCDLSHNHAWGIRLHG
SSSCRLERNRAQYVNRCGGTGCDAAGILVTGGSHRNLIAGNDLRWSGDGFFLGNQFSPPS
DENLVVGNDGSYSPNNAFEATFSRGNVFRRNRACWSNFGFWLGFSTDTVLEGNLITDNRL
DGVHWEHGARGVLRDNLIARNGRDGVAFTLDPANRDFPDRCVSTGHELRDNCFAANGRAA
VFLLHTTRTRLVGNRYRAERTPLLLAGDTRENEIQDVFTTT
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Identical sequences B9L4G5
WP_012642552.1.69661 gi|221636085|ref|YP_002523961.1|NC_011961 gi|221636085|ref|YP_002523961.1| 309801.trd_A0679

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