SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 31234.CRE26710 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  31234.CRE26710
Domain Number 1 Region: 43-499
Classification Level Classification E-value
Superfamily Sema domain 3.27e-115
Family Sema domain 0.0000372
Further Details:      
 
Domain Number 2 Region: 1443-1570,1773-1957
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 6.54e-32
Family p120GAP domain-like 0.015
Further Details:      
 
Domain Number 3 Region: 940-1038
Classification Level Classification E-value
Superfamily E set domains 0.0000000000000502
Family Other IPT/TIG domains 0.015
Further Details:      
 
Domain Number 4 Region: 1036-1125
Classification Level Classification E-value
Superfamily E set domains 0.000000000000302
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.066
Further Details:      
 
Domain Number 5 Region: 502-543
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000759
Family Plexin repeat 0.0023
Further Details:      
 
Domain Number 6 Region: 1125-1193
Classification Level Classification E-value
Superfamily E set domains 0.0000007
Family E-set domains of sugar-utilizing enzymes 0.027
Further Details:      
 
Weak hits

Sequence:  31234.CRE26710
Domain Number - Region: 887-934
Classification Level Classification E-value
Superfamily Plexin repeat 0.000122
Family Plexin repeat 0.0031
Further Details:      
 
Domain Number - Region: 1241-1308
Classification Level Classification E-value
Superfamily E set domains 0.00262
Family Other IPT/TIG domains 0.05
Further Details:      
 
Domain Number - Region: 627-658
Classification Level Classification E-value
Superfamily Plexin repeat 0.00589
Family Plexin repeat 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 31234.CRE26710
Sequence length 2015
Comment (Caenorhabditis remanei)
Sequence
MPKFLQFSLILLLLSIKPAWTAKPNSNNVYSIDDNLVFENPSQNGQEVFEKMAIDPSTTR
VFVGAVNSLYDLTSADLTVRRHVQTGPQDDSPLCRDARNREDCRHQLSRTNSHTKALAVY
DKSSKLIECSNLFQGRCRLRNLHNISEVISEAIEPRVSNDTTSSVVIFVGQGPANLTTDP
VLYVGATIGSADHDRMSVSSLFLRPQKAFEIVFPGLYGGTHVSLDYRSRGYYKYQIDYIN
GFESGDYAYFVTRQRKTIHDDSLIQSRLTRVCTGDKNFHSYTEVPLECTQNGIDFNLVQD
VYVTRAGYELAKSLDISVSDPVLYGVFWEGDKNSYRAQEPTGKSAICMFTMKDIETAFKQ
NIMKCYKGTSGLKKNLPWFSSNDDCRFTTLPWEGIKCGKDVNSKIGGDTPIATSATYVID
DSAQLLTSIAINTTRSSTVAFVGTQGGKLHKILIESKRTAEKYATEILTENEPILSDMEF
SGDGKHIYILTPSKVIKMPTSRCETLSSQCDTCLASRDPYCGWCVSNNHCTQEESCEREV
PHTARGWLDFQNSKCPRIRSVKPDQIQINTADYLNVTIENLQAPKGRRMQCLFQFPTGDA
VVSDPMPFDGSLTCSKLPLATTNFSFYDCNRYTSCSTCSASQFPCDWCLESNECVAGKLT
EDKCRKQHIVNGLNRDGSSIRKGPSKCPHIVAPVSKMSVATGERRNISVKVENVDPSFMG
DFKCEFRYGTVTHEKIAMRTSDDTITIRSVKPDQIQINTADYLNVTIENLQAPKGRRMQC
LFQFPTGDAVVSDPMPFDGSLKCATPPMNRLPRIPTNEYHLAAKLIVVSDGNCDEMLFEP
YGTSLLGSGSTAYGFNVIWSATTSSGTTKKSINRLLDNVDNLSIDVYSCENLAPNCGKCL
TLDADKYDCGWCTVAGKCARPHQCPNRQIPENWLNATQLCPNPEIEDFKPKKGSIYGGTR
VTITGINLGRHVSDVEKAVQIANVACEVVEYVPSQKIICVTGKSTIKGSNERGVVAVTLR
HDSLKFFTHSKEHFQYVEPVVSSMKPVKGPRSGGTDVILTGVDLDTGAEVTVRFGQIGCR
VLERTSGWLKCRMGQSPEGGQYPMHIAFDGQLQTMPIPIYFEFTSDPSVQSIAPNKTIPS
GGITVDVYGQGFTLLQRPRMVFVGLGDDKSYGPQCSVIDDQLMKCATPTAPGASRDSEKS
QMERITEYAFDFDGAELYRSRIKVMPAPSFEMLTEPRFVRPGEDFLTLNGNHLNLAASER
DIEVKVGGEACPLTALANKILTCQPPVKKPIGAGKLNPEIVVTVGNASFSVGEVSYDSPG
LSSSLFFIILIFILFMIGLIICLIVLYRRKTNTHQRQMKYLKTQMDTIEMKVATECKEAF
AELQTSLNQYTADLPLGTPTAPFLEYKDYCARVLFPNGGKNHPVLKNLEVDTHKAEAIEA
GLREFHKLLMNKTFLLTMVRTMEANKYFVGKDRVYVGSLLMVVLQEKMGYCTEMLKQLLR
ELIEKTVEKKFQPKILFRRSESIAERMLAAWFTFLLHDHLKTYDAGKKLYELFWGIKQQM
EKGPQDALTLEARYSLSEEKLLRATFEYKELTVFVNSTDSVYSSQQSDIPVRVLDCDTIT
QVKEKCLDAKYRGYRFADRPAASEMELEWKTGLNGKMALQDIDTSSRIEGGNWKRLNTLA
HYNVPNNAILTLTSKSNSLYNLSILSDRSEKSSLSMKTGGGVGSPKPWGGAPPSVIADHA
SSSADTDNGYKLYHLVKPTEHGPTDSQEKMVTEIYLTRLLMMKGTLAKFITSLLESIFSS
RTVPPCIKYMFDFMDEQAREHGIMDPEVVHAWKSNALPLRFWVNLIKNPHFLFDIQKPTK
IEGCLSVVAQTLMDACSTQDHQLTKDSPSSKLLFAKDMYQYRDLVDSYYTEISMTPRIDD
ATMGANLSAESRQHNGEFHVFSALNELYKYLDQYKESIIDALESNEHAQASRLPGRLQDL
LALMESDYYRATDYESSTLGLGYNSNSRLMPRDRL
Download sequence
Identical sequences E3MXT1
CRE26710 31234.CRE26710 XP_003099038.1.11157

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]