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Domain assignment for 316056.RPC_2542 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  316056.RPC_2542
Domain Number 1 Region: 1279-1530
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 7.18e-40
Family Complement components 0.017
Further Details:      
 
Weak hits

Sequence:  316056.RPC_2542
Domain Number - Region: 55-163
Classification Level Classification E-value
Superfamily TPR-like 0.013
Family Tetratricopeptide repeat (TPR) 0.043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 316056.RPC_2542
Sequence length 1737
Comment (Rhodopseudomonas palustris BisB18)
Sequence
MRGLLRAVMLCATLALGLLSAAAADKAFKRDDLADSAIKLEAQIKSEAGAVSKPVAALRA
DADAAVKRGDSRAALQIMGQIATVSPDDSGNWLRLARAVFRIWTPTGSDQALLLERASTA
AYIAYQRAGNAGEEAEALALLGRAFAERKLWRPALDTLRLSLDLREVAEVRGQYEKLRDD
HGFRLLDYTVDSDSASPRACFQFSEDLAKRVDFAPFLAQAGTDKPALTSEDKQLCVEGLK
HGERYTVHLRAGLPSAVKETLPKSAEFNIYVRDRKPLVRFTGRAYVLPRSGQRGIPLVSV
NTKTVSVEVFRIGDRNLINTVVGSDFQRALSAYELTELGGERGIKVWSGELDTESTLNAD
VTTAFPVGEVLGELQPGVYVMAAAAKGPAASGDEDGGSLATQWFIVSDLGLTAFSGNDGI
HVFVNSLASTEPVGKAEVRLLARNNEILATRKTDDSGHVLFESGLSRGEGGSSPALLTVS
GASADYAFLSLKSNAFDLSDRGVSGRAVPAGADAFVYAERGVYRSGETVYLTALLRDGQG
NALAGAPLTLVVERPDGVEFRRAVLPDQGAGGRSLTLPLNSAVPTGTWRVRAFTDPKGGS
VGETTFMVEDYVPDRIEFDISSKDKLIKADVPVELKVDGHFLYGAPASGLQLEGDLLVAP
AADRPGFAGYRFGIADEETESHERTPLENLPEADANGVATFPLVLPKPPASTRPQEAQIF
IRMAEAGGRAVERKLVLPVVPAAAAIGVKPLFADKTVTEGDNANFDVVLVSPEGKPLARG
GLRYELLKIETRYQWYRQNSSWDYEPVKSTRRVADGDLSLAADKPARLTFQPQPGRYRLD
VKSADADGPLTQVQFDVGWYSDGSADTPDLLETSIDKPDYAAGDTLVVTVNARSAGKLTV
NVLGDRLLTTQSVDVQQGQSQVRLAVGKDWGTGAYVVTTLRRPLDAAAQRMPGRAIGLKW
FGIDKTARTLSVALSPPALIRPSTTLTLPVKIGGLTPGEDAKIVVAAVDVGILNLTNYKP
PAPDDYYLGQRRLSAEIRDLYGQLIDGMQGSRGQIRSGGDSAGAELQGSPPTQKPLALYS
GIVTVAADGTARIDFEIPEFAGTARLMAVAWTATKVGRATIDVTVRDPVVLTATLPRFLL
GGDRGTLSFDLDNVEGAPGDYAISVAASGPVKLAGNPTTTLKLAAKQRSTMALALEAGGA
GTAAFDVSIKGPNGLTLARHYAIEVKPATQILARRSIRTLAKGESLTLTSDMFADLVPGT
GGVSLSVGLSTALDAATILKALDRYPFGCTEQIASRALPLLYVNELAAGAYLAMDGTVDQ
RIKDAIDRLSARQGSNGSFGLWSAGGDDAWLDAYVTDFLTRAREKGFVVPDVVFKSALDR
VRNAVVNAAEPEKDGGRDLAYGLYVLARNGAAPIGDLRYLADTKLDNLATPIAKAQLAAA
LALVGDRGRAERVYADALQSLTPKPVIAFGRVDYGSALRDAAALVSLASEGNAPRATLTQ
AVQRVEAARGLTPYTSTQENAWLVLAARALAKETLALEVDGSPVKTALYRSYKASEMAGR
PIKIVNTGDAPAQAVVSVSGAPMTPEPAASNGFKIERNYFALDGTPAHILKAKQNDRFAV
VLKITEAKPEYGHIMVADYLPAGFEIDNPHLVSSGDSGTLGWIEDGVEPVHSEFRDDRFS
AAIDRKSDDKAVFTVAYVVRAVSPGKYVLPQAYVEDMYNPSRYGRSSTGSVEVRPAK
Download sequence
Identical sequences Q214U4
316056.RPC_2542 WP_011472989.1.69038 gi|90424041|ref|YP_532411.1|

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