SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 316058.RPB_3414 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  316058.RPB_3414
Domain Number 1 Region: 14-221,267-312
Classification Level Classification E-value
Superfamily Nucleotide-binding domain 6.47e-55
Family N-terminal domain of adrenodoxin reductase-like 0.00011
Further Details:      
 
Weak hits

Sequence:  316058.RPB_3414
Domain Number - Region: 304-436
Classification Level Classification E-value
Superfamily Nucleotide-binding domain 0.000353
Family N-terminal domain of adrenodoxin reductase-like 0.00082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) 316058.RPB_3414
Sequence length 445
Comment (Rhodopseudomonas palustris HaA2)
Sequence
MTAAARDPAPAAAFRIAVVGSGPSGFYATEALFRSGTPVAVDMFEQLPVPYGLVRFGVAP
DHPKLKQVTVAFDRIATMPGFRFVGGVTVGRDVTIDELRASYDAVILATGADVSRALGIP
GETLAGCHHAGDFVAWYNGHPDYRDCSFDLAHDAVTIVGHGNVALDVARILARTVDELRL
TDIASHALEVLAESRVREIHLVGRSGPRQAKFGAKELRDFLALAQCDAVVDPRDVAAASV
GETSNDPEMSEKLELLGAVSQRPVGKQRRCVFRFGLSPVAINGRGRVEEIAFADPSRSIE
AIPCGVVFSSIGRRTAPLPGVPFDAQRGVHANVDGRVVDTHGVVPGLYVCGWSKRGPSGT
IGTNRACGMATAEAVLTDLPARAGSRLRDPDILLAQLRGRVSRIVSFDDWSAIDAAEKSR
GVAQGRPREKFVSVPEMMAVLASTP
Download sequence
Identical sequences Q2IUK0
316058.RPB_3414 WP_011442294.1.50975 gi|86750525|ref|YP_487021.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]