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Domain assignment for 316273.XCV0337 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  316273.XCV0337
Domain Number 1 Region: 297-498
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 5.1e-53
Family Multidrug efflux transporter AcrB transmembrane domain 0.00000024
Further Details:      
 
Domain Number 2 Region: 814-1002
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB transmembrane domain 2.22e-41
Family Multidrug efflux transporter AcrB transmembrane domain 0.000000695
Further Details:      
 
Domain Number 3 Region: 571-673
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.27e-29
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00013
Further Details:      
 
Domain Number 4 Region: 38-131
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 1.27e-26
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0000366
Further Details:      
 
Domain Number 5 Region: 136-183,275-331
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 9.94e-25
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.00023
Further Details:      
 
Domain Number 6 Region: 183-272
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 6.41e-20
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.00011
Further Details:      
 
Domain Number 7 Region: 674-723,786-834
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 2.41e-18
Family Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains 0.0015
Further Details:      
 
Domain Number 8 Region: 707-782
Classification Level Classification E-value
Superfamily Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 6.15e-16
Family Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains 0.0000979
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 316273.XCV0337
Sequence length 1025
Comment (Xanthomonas campestris vesicatoria 85-10)
Sequence
MARFFIDRPIFAWVIAIVITLAGALSILSLPLEQYPNIAPPTINVSATYTGASAQTVQNS
VTQILEQQMTGLDHLLYMSSSSSSAGTASITLTFDSGTDPDTAQVQVQNKVSQGESMLPE
AVQSNGVTVTKSTGSSMFMVLAFTSEDGSMDSTDIGDYMVSTLQDPISRLNGVGGVNVFG
SEYSMRVWLDPDKLRTYALMPADVSNAISAQNADVSSGALGALPAVQGQQLNATVTSRSK
LKTPAQFEAIVLKSQPGGATVYLRDVARVELGSKSYASSSKYNGKSASGMGLELATGANA
LDAAKAVEDKLEQLKPYFPTGLKYEIAYDTTPFVRISIEEVVKTLLEAIALVVLVIYLFL
QNWRATLVPVIAVPVVLLGTFGVLALLGYSINTLTMFAMVLAIGLLVDDAIVVVENVERL
MSEQGMSPRQATHTSMGQISGALVGIALVLTAVFLPMAFFGGATGEIYRQFSVTIAAAML
LSLLVALTLSPALCASLLKPIARGGHVSRQGMLGRFFGRFNARFDRSAEGYGRGVGTLIG
HRKLGGLVYLALLVVMALLFWRLPSSFLPDEDQGMLMVMFTTPAGATQQRTQQSIDQATD
FILKQPEVAGMMTISGFSFAGSSQNSGMGFIKLKDWAQRDAPAQEIANRITGAMMGALPD
AQVFALSPPAINGLGTSSGFTLQLQDVAGKGHDALVTARQQLLQLANADKAGALGLDAAD
INTTLATVMGGSYVNDFLNNNRVKRVYVQGEPSARMLPADIGRWYVRNSSSEMVPFSAFS
SSAWAYAPQVLSRFNGVESMEITGSAASGISSGEAMNGIAGLVGKIGKDVGYAWSGMSYQ
EQAAGAQTWMLYAVSLVFVFLCLAALYESWSIPISVMLAVPVGIVGALLATWLRGLSNDI
YFQVGLLATMGLAAKNGILIVEFAKELEEKGQPLIEATLHAARMRLRPIVMTSLAFLLGV
LPMVVSSGAGSGGRHSLGTGVLGGTLVSTLLGIFFVPLFYVMVRSVFPDKASDHATAAET
SEVAP
Download sequence
Identical sequences Q3BYU5
gi|78045893|ref|YP_362068.1| 316273.XCV0337 WP_011346032.1.100156 WP_011346032.1.331 WP_011346032.1.46449 WP_011346032.1.46677 WP_011346032.1.60785 WP_011346032.1.89212

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