SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 318161.Sden_2739 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  318161.Sden_2739
Domain Number 1 Region: 9-175
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 4.02e-32
Family GHMP Kinase, N-terminal domain 0.00035
Further Details:      
 
Domain Number 2 Region: 193-308
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 1.4e-24
Family Homoserine kinase 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 318161.Sden_2739
Sequence length 328
Comment (Shewanella denitrificans OS217)
Sequence
MISKEKAPLTVYAPASMGNVGVGFDLLGAALAPIDGSLLGDKVTISQASNSTASPASLHA
SGEIHFSQTGIWSHKLPTVPEDNIVYQCAQFFLDKLGVKTGIALNLEKNLPVGSGLGSSA
SSVVAALYGLNEYFDTPFEPQVLLQLMGEFEGKISGSVHYDNVAPSYLGGMQLMLDSPSE
LCAAIPHFKHWYWLVAYPGISLSTAKMRALLPAQYDKAVTIDFGRHLSAFVHASHSQNPK
LAIEVLKDVLAEPYRADAIPGYKQASGALNQLGMLTTGISGSGPTLFSITDDIGLAEKAK
AWLTDNYVTQDGGFVHICHIDEQGARRV
Download sequence
Identical sequences Q12KK8
318161.Sden_2739 gi|91794090|ref|YP_563741.1| WP_011497168.1.19895

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]