SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 3218.JGI12061 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  3218.JGI12061
Domain Number 1 Region: 3-110
Classification Level Classification E-value
Superfamily POZ domain 0.000000000000011
Family BTB/POZ domain 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI12061
Sequence length 561
Comment (Physcomitrella patens)
Sequence
VSSDAPTDIVVDVGGQSFAVHKCALVARSGKIRRLVACERANEDGIIHLQLADLPGGSEA
FDLAAKFCYGINYDITTYNVALLRCAADYLEMNEQWGDNNLVDRTEKFLNEYVLQNLAES
IAVLHNCESLLPLAEDLKLVNRCVQAAAVKAVREQIGGGLNRSEFDGSLRLDNAKPAFND
SPAAPVVEWWAEDLAVLRFDFFQRVLTAMRTKGLRCESLGGAVMHYAHRALKGIHKRQTM
KSPKPQHEQRILVEAIVSILPPEKTAISCSFLFGLLRAAVVLETTLACRLDLERRIGLQL
EQATLDDLLIPSANHNVDTLFDVDAVQRILNCFMQQDGAEDVDDTHPMYDVEGAGSPTHS
ALVKVAKLLDTYLAEIAPDANLTMNKFITLAEVLPEHARTVDDGLYRAVDVFLKAHPAIS
DAERKTLCKLIDCKKLSQDACTHAAQNERLPVQVVVQVLYFEQLRLRNAMSSINSRDPAL
RHQLSQRMTVGNLTGSQSPNENYESVRRENRDLKLEIGRMRMRLTELERDQTNMKMDIVK
SGGGTKFIDSVSKRISKLNPF
Download sequence
Identical sequences A9SD60
jgi|Phypa1_1|12061|gw1.67.45.1 XP_001764279.1.60028 3218.JGI12061

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]