SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for 3218.JGI161287 from STRING v9.0.5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  3218.JGI161287
Domain Number 1 Region: 5-41
Classification Level Classification E-value
Superfamily POZ domain 0.0000392
Family BTB/POZ domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI161287
Sequence length 465
Comment (Physcomitrella patens)
Sequence
MPGGAEAFELCMKFCYGKLAELTPHNLAALRCAAEYLEMTESLEKGNLVSRTEQYLSYVI
LASWKDSITVLQSCQRLLPWAEETELVKRLSESHVPHDWWVEDVIQLNFSAFRKVISAMT
AKGMAYTLVGSAIAQYGTRWIPGNYWQSLDQAENRALVEGVASILPPQQDAVSCSFLLRL
LRAACEFGARAPCREDLERRVGLQLEHASFSDLLIPSSHPASLTMYDLDVVQRILEQFLL
KVCCYSLNSTPNKSKVAKLMDAYLAEVARDANLPLARFQNFAESVPQFSRSTDDGLYRAA
HPTMTEHERKKLCRVMDCQRLSLEACLHAAQNERLPLRVVVQVLFSEQIKLRNSITGNTP
KKSHDGSGHPSISDFQDIKYLKQDMERMKAKYADLEHGFLLQQVERKPKPKPSSSSAWTS
GWRKMSSSLKRPNLFHSSKQECRSQSRRIVATGDGQTSTTVLPHH
Download sequence
Identical sequences A9RVH3
jgi|Phypa1_1|161287|estExt_fgenesh1_pg.C_310120 XP_001758126.1.60028 3218.JGI161287

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]