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Domain assignment for 3218.JGI169211 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3218.JGI169211
Domain Number 1 Region: 1933-1987
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 8.64e-17
Family PHD domain 0.0021
Further Details:      
 
Domain Number 2 Region: 278-332
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000221
Family PHD domain 0.025
Further Details:      
 
Domain Number 3 Region: 1778-1878
Classification Level Classification E-value
Superfamily Bromodomain 0.00000000157
Family Bromodomain 0.0046
Further Details:      
 
Weak hits

Sequence:  3218.JGI169211
Domain Number - Region: 648-696
Classification Level Classification E-value
Superfamily DNA-binding domain 0.00147
Family Methyl-CpG-binding domain, MBD 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI169211
Sequence length 2557
Comment (Physcomitrella patens)
Sequence
MDTDFLGTRHVELGALPSSSVKLCMDTCSSQTSLIIRTIIPIFHRVKISLFVDGEIEMDA
SLRRECSAPEVPLQVEASGGTEAGYNIGKQGTSGVLEAQPTGVSSVEPMQNAEASPLDGS
SKMPVHVSKGGTNENFRVFGSSTAENLVMPTLQNSDNGNVETLKKEHVLSLKKSSIENGA
KRESELSNGSKGVLKDIPPKSQVPMRKLARKSGLLKSETIPAPKTELSVADAVKEGILKK
EREEQDRKEAVDAVMEIHGVRKQVTGHAVSFPGVAGPESGRLCHCCSRPESSKSTIFCDK
CERGFHVDCVKHWPKPAQELDVWHCGPCGLQPGHYWPLGRVLIIYDNAVAEYKKYSSSFL
TTLQRKEESSFGTFSQGMGQTTHEKSDGLEGVAKVKVIRDFKKEARKGNSKVSKAVTSSV
SVVSKAGPGMPLHVKEFGSVTDIEASGESVQQPKPLSYSGFVPIQPKSSLSSIAPIVNFM
VPPEANAVKTLTSPNVPIPPSHQSRNILLFNEFTVSSTPGFSHTGSISSHVAEPKVLYTT
SKDSTGPTALSSKIEIASVRSQHQKTSVMDQYAASPKPNLLGFSHLSSTPNQMSVQQKTA
LASGAVSIEVSSTERLRPFAVGERLTEREELLKEAKDSLNQLRTFITALKGNLAEDWRVI
LRKRPTGAQEKFYLSPAKRKYRSRQDVARFLGLVDDPKCQRTKPCNLGTSLDKPLDKNNS
HPPASQANAVTNLPMFCGDVMIEKLGVIDSRPTYSDEHHIWPVGFRSSWHDPETRSYCIS
EVEDGGELGPIFRVTRKLVIVPANGKNDLLATSSLGEAALDISGIPVEPKKVKIWEDISS
SHEVTSEVVSAKIGDSSIFKVPTEGNQIDAQKQHTEVFNKHASKFGVNIEAGSEKEGVSQ
FEEAREGKTSIMNGDPSSASSTKQILASHSIGQSIIDLTEEKELPLKPHSETVLDIKVSA
SDVKGDLSTIDVTKDACASENVKVNLHHSETPPVVIELSDEEDEKPSSLVFSDKASAAAR
EGPGKASGFSLPHIKPLPNNLMEELTVEARRPGEAWKVFGKKFVEQCKKSLGSGLNCAVP
ILDATNDYVIYNSGTSTLWDGSTDIANAALLNQKSVDGSETTKALFYDRLEKRLGEDRFG
LNLPVVQNMIKALRIGKPAGYDEAWVKGVDQIDEAAHTASLSLPSQIKETAVTPSDPWKR
KKRKKNLDLLAEGNVKKGKPSSAEPAALHPLDLRAGEQFGIEKVVFRNLPPVSSTPTPLL
ASAIGLGQATGPITTAVAAAAAAAAAAPPPPVVIIEEPRQPPPAGEPILKRLPSELVGDL
LQVWEFLCRFSDLFGQDVRFTLEDLEAGLLDVGPVREVEVTTEAKDCSELSGRKGRVSTV
VDFSEPSVRTGREGVEYVVDLSESSERDPMKGDKVLNKFIGTADRSHESAEVPDLGQGFN
AVMGIVEDAEMKEECCEDLKLEGKESNLHALEEEQSGTKNAVEVFKGTVSKGIAFLAEAH
IPLLKFLVSDLKFRISRGLNEDEVEEPKKRGRKRICDVGPLPPEFGDDLPMNAVTWPEVA
HRYLVAILDVKKHGDITELAPDERKKLMRYFEGDGGVMGGAVEGVVGVESDAQNLTNAVF
VLDTQHYSWKVLAEAEKELTVRMPKTVEKDIVIFVPQEWDVALTPINPAPKKAKNRKTGD
LDPLPKWVEALEPVRKMPTNLGTKLKLQVQEALDYDPPDWAKGTLEWSLSKGTFKSNAAG
TTKRAVLEVLAQYHGEELKAINAPRIRKVKAAPSAEHLMQRCRIVLREVAKADSKQVFGN
LMGGASAVKSSKDVGTLARPLDFRTIDARLAAGAYGGSTDAFAADMRQIWKNVESVHKSG
SAILELANTLSQLFEKLYLKQVVSLIKGMPDTKDDKEKVSDVDTKVDGSVRSNSKAGTKG
SGNAADDKLGKAPWEDDTTCRVCGVDEDYDSILLCDGCDAEYHIYCLVPPLEKVPKGNWF
CPSCVAVEEGYPEAPSLGEAELREMQEEKERPVAGSILKLEYEDEKVPSIVLEKKPEAEK
IGRELRSGIVAGLAVEDEALCEEPDAHFPAVEISVEALLKKLEEKDYWQLSLPDKLFVLK
FLCDEALKTPQARAHLEKSVEVTLELQQQLRDLVAERLKIVVPMDVIGHTKPIDKDNLQK
PQTNSLPGPSLDTTELKDGVGTAVRASGLELESLGVAETPKLTTVSFPTSNSDDDVLVIG
KFSSKTITQENNAGVGKVVHDLDLNVEAGKEPEPDHLRSDHNASFGTSPVELNKERLLVK
GFENTKPVELDAVTASQTENTVKVILNQLSPDQKPGLLQDSEQRASEHHGRARESDSGRI
HVASVTEGVEDVVTIQPDAASRPLNPLKRSLVIGESNLPSTSMNGPENVKKAKKEENAIQ
STPSGIHGTETNDPIKEPSDAQATASKILEDKDARTKALQTARELDMKITKLGSKLFNLT
LRREHIGTDHLGREYWALTGIDGRPCLVVADTSAPQERAGQGTNSGSCSQTVEFQGIEDL
LVMFPTLPKSGTPRLSDIDLRHVKAMLCIWPYNFHMV
Download sequence
Identical sequences A9TBW6
jgi|Phypa1_1|169211|estExt_fgenesh1_pg.C_2000065 XP_001776070.1.60028 3218.JGI169211

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