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Domain assignment for 3218.JGI204046 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3218.JGI204046
Domain Number 1 Region: 5-141
Classification Level Classification E-value
Superfamily SNARE-like 2.52e-30
Family Clathrin coat assembly domain 0.028
Further Details:      
 
Domain Number 2 Region: 282-520
Classification Level Classification E-value
Superfamily Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 5.89e-30
Family Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI204046
Sequence length 521
Comment (Physcomitrella patens)
Sequence
MVVLAASIISKSGKALVSRQYVDMSRIRIEGLLATFPKLVGIGKQHTYVETDNVRYVYQP
MESLYLLLVTNKQSNILEDRDTLQLLSKLVPEYVPSLDEEGICKMAFEIIFAFDEVISLG
HKENVTIAQVKQYVEMESHEERLHKRIMESKINETKDLMKRKANEIEKSKIEKGRGDKGN
FVPSMPSMGSSRIDNGFGDPSIDGGMRTNSSGFGPGVDADVFKSKARVTSTSAPSKGGMQ
LGKSTKTNQFLESLKAEGEVIVEDVAPGPVRSAAAIAPIYSDPIMVGVEEKLVVVLKKDG
GLENLEVQGNMSLVVQKEEDAYIRVQVESSANKLFNFKTHPNIDKNLYSDSNILGLKDPS
RPFPTGNPLGILRWRMQSKQESLVPLSINCWPSVSGGESYVNIEYEASRSFDLQNVVIHI
PLPAIRDVPTVNQADGEWRYDSRNSLLEWTITLIDNTNRSGSMEFVVPAADPNSFFPIDV
KFSSNKTFCDLKVGSVVQTQNGNAVKFGRRTQLLVDSYQVV
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Identical sequences A9RMY5
PP1S18_1V6.1 jgi|Phypa1_1|204046|estExt_Genewise1.C_180001 XP_001755470.1.60028 3218.JGI204046

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