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Domain assignment for 3218.JGI209418 from STRING v9.0.5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  3218.JGI209418
Domain Number 1 Region: 13-270,303-359
Classification Level Classification E-value
Superfamily WD40 repeat-like 3.16e-58
Family WD40-repeat 0.00079
Further Details:      
 
Domain Number 2 Region: 693-759
Classification Level Classification E-value
Superfamily NHL repeat 0.0000549
Family NHL repeat 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) 3218.JGI209418
Sequence length 988
Comment (Physcomitrella patens)
Sequence
MIVEKPTWLRHAGLQIFSVDTQPNGLRFATAGGDHKVRIWNMKPLAEKETDSDTKLLATL
RDHFGSVNCVRWAKCGQKIASGSDDQVVYIHEKRPGSGTTEFGSGEPPDVENWKVLLTLR
GHSADVVDLGWSPDDTQLASCSLDNSIRIWQTSTGALLSVLTGHQSLVKGLTWDPIGSFL
ATQSDDKSVIIWRTSNWSMVKKVEGPWEKTVGSTFFRRLGWSPCGHFIATTHGFQNPSHT
APVLERGEWMASFDFVGHNAPVVAVRFNHSMFRKVKTIALSGNGAILGAANGTSSKTKEP
PPYNVIAIGSQDCCISVWTTGSPRPVFIGKHFFQQSVVDLSWSPDGYTLFCCSLDGSVAS
FQFERKELGEKISDAEMEEFKKSRYGDLRVRQATVAESPAQLMLEAAAAKQWGSGNASNA
NTIDSTKAVSQAENGAVTAEVPKKVLTKPPSAPAPEVPIKVPTKPPSAPALGADVRNGSL
VPSVPLLTPRVNPSPVKQTEYRRADGRRRIIPEPLGPPRGDDVFGNGALHSTIKNDSVTI
TADARKEDLGSIGLKSSESAFKRNNGSALNEALAPAACCSSAAVVAIGVGNEGPPNIASG
GVQADVVVPAEKMTTPEGVLSIRIREPEGAGGEDSKNRAPIYLEARPADCTSNLGSVLGS
TAPISIRESSAKAKIICSQGGEVRWCDYLVSMPTALAGNSNFWAVACGDGSLQIYTKAGR
RAQPSLMLGSAAAFMDCDENWKLMVVTRNGSLYLWDLQESRRLLHESLGPLLNSTSANSM
LASNGTMKLVSARLSKAGAPLVVLANRHAFIFNSSMCCWLRVADDTFPASNFVSAWPDAD
DGELANLQAGVAVAAGPSFLWNRMSLSEEKWQTRVHLEVQMSSALALKSASEYRRCLVAY
ARCLSKESDEARLRELCEELLGPVGSVGKLQLSKPDILGMSKRELLKGIVLPAMASNRAI
QRLLNEFVDLVTECEAAEKALEPGGSIL
Download sequence
Identical sequences A9S7J0
XP_001762381.1.60028 jgi|Phypa1_1|209418|estExt_Genewise1.C_540092 3218.JGI209418

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